LOCUS       BC127657                 578 bp    mRNA    linear   HUM 22-NOV-2006
DEFINITION  Homo sapiens protein tyrosine phosphatase, receptor type, C, mRNA
            (cDNA clone IMAGE:40119800), complete cds.
ACCESSION   BC127657
VERSION     BC127657.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 578)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 32 Row: b Column: 16
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..578
                     /db_xref="H-InvDB:HIT000389285"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40119800"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_282"
                     /note="Vector: pCR-Blunt II-TOPO; Clone identification
                     sequence tag: CAATTTA sequenced from the reverse primer"
     gene            1..578
                     /gene="PTPRC"
                     /gene_synonym="B220"
                     /gene_synonym="GP180"
                     /gene_synonym="LCA"
                     /gene_synonym="LY5"
                     /gene_synonym="T200"
                     /db_xref="GeneID:5788"
                     /db_xref="HGNC:HGNC:9666"
                     /db_xref="MIM:151460"
     CDS             30..134
                     /gene="PTPRC"
                     /gene_synonym="B220"
                     /gene_synonym="GP180"
                     /gene_synonym="LCA"
                     /gene_synonym="LY5"
                     /gene_synonym="T200"
                     /codon_start=1
                     /product="protein tyrosine phosphatase, receptor type, C"
                     /protein_id="AAI27658.1"
                     /db_xref="GeneID:5788"
                     /db_xref="HGNC:HGNC:9666"
                     /db_xref="MIM:151460"
                     /translation="MYLWLKLLAFGFAFLDTEVFVTGQSPTPSPTGKN"
BASE COUNT          185 a           85 c           80 g          228 t
ORIGIN      
        1 agggacacgg ctgacttcca gatatgacca tgtatttgtg gcttaaactc ttggcatttg
       61 gctttgcctt tctggacaca gaagtatttg tgacagggca aagcccaaca ccttccccca
      121 ctggtaagaa ttaatattta tatttttact aattttattt tcttgttgca aagtttatat
      181 atttaactac aattttctat tattaacact gaaattattt ttaaggataa attttataat
      241 catgagtgat tcttgacatt cacttgttct taaactttct gcttatacgt tatagagttt
      301 aataactacc taaacatgtt attaaatttg tatatatatt ttgtgtataa atagtaactt
      361 ttcccaaact tgacagtaaa tcacacaaca ggtttctact ctcttttaat attttaagac
      421 tataaaaaaa tgcatttaaa ttagataaca aaattttata gtctgaaagc aggttaacag
      481 ctgtctatgt atgttataga tatgtagata acagatttgc atatgtctat atttctttaa
      541 gagtatgttg cttttttcag tggtatgcaa aaccttta
//