LOCUS BC127263 1121 bp mRNA linear HUM 06-NOV-2006 DEFINITION Homo sapiens signal peptide, CUB domain, EGF-like 1, mRNA (cDNA clone IMAGE:40128679), complete cds. ACCESSION BC127263 VERSION BC127263.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1121) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1121) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCG Plate: 9 Row: d Column: 10 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1121 /db_xref="H-InvDB:HIT000389241" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40128679" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: CACAAAAA sequenced from the forward primer" gene 1..1121 /gene="SCUBE1" /db_xref="GeneID:80274" /db_xref="HGNC:HGNC:13441" CDS 25..1116 /gene="SCUBE1" /codon_start=1 /product="SCUBE1 protein" /protein_id="AAI27264.1" /db_xref="GeneID:80274" /db_xref="HGNC:HGNC:13441" /translation="MGAAAVRWHLCVLLALGTRGRLAGGSGLPGSVDVDECSEGTDDC HIDAICQNTPKSYKCLCKPGYKGEGKQCEDIDECENDYYNGGCVHECINIPGNYRCTC FDGFMLAHDGHNCLDVDECQDNNGGCQQICVNAMGSYECQCHSGFFLSDNQHTCIHRS NEGMNCMNKDHGCAHICRETPKGGVACDCRPGFDLAQNQKDCTLTCNYGNGGCQHSCE DTDTGPMCGCHQKYALHSDGRTCIETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQPD GKTCKDINECLVNNGGCDHFCRNTVGSFECGCRKGYKLLTDERTCQDIDECSFERTCD HICINSPGSFQCLIKLLRSKVSRFLRPYK" BASE COUNT 260 a 330 c 339 g 192 t ORIGIN 1 aacacagcgg ggcccgcatt gagcatgggc gcggcggccg tgcgctggca cttgtgcgtg 61 ctgctggccc tgggcacacg cgggcggctg gccgggggca gcgggctccc agggtcagtc 121 gacgtggatg agtgctcaga gggcacagat gactgccaca tcgatgccat ctgtcagaac 181 acgcccaagt cctacaaatg cctctgcaag ccaggctaca agggggaagg caagcagtgt 241 gaagacattg acgagtgtga gaatgactac tacaatgggg gctgtgtcca cgagtgcatc 301 aacatcccgg ggaactacag gtgtacctgc tttgatggct tcatgctggc acacgatgga 361 cacaactgcc tggatgtgga cgagtgtcag gacaataatg gtggctgcca gcagatctgc 421 gtcaatgcca tgggcagcta cgagtgtcag tgccacagtg gcttcttcct tagtgacaac 481 cagcatacct gcatccaccg ctccaatgag ggtatgaact gcatgaacaa agaccatggc 541 tgtgcccaca tctgccggga gacgcccaaa ggtggggtgg cctgcgactg caggcccggc 601 tttgaccttg cccaaaacca gaaggactgc acactaacct gtaattatgg aaacggaggc 661 tgccagcaca gctgtgagga cacagacaca ggccccatgt gtggttgcca ccagaagtac 721 gccctccact cagacggtcg cacgtgcatc gagacgtgcg cagtcaataa cggaggctgc 781 gaccggacat gcaaggacac agccactggc gtgcgatgca gctgccccgt tggattcaca 841 ctgcagccgg acgggaagac atgcaaagac atcaacgagt gcctggtcaa caacggaggc 901 tgcgaccact tctgccgcaa caccgtgggc agcttcgagt gcggctgccg gaagggctac 961 aagctgctca ccgacgagcg cacctgccag gacatcgacg agtgctcctt cgagcggacc 1021 tgtgaccaca tctgcatcaa ctccccgggc agcttccagt gcctgatcaa actgctgcgc 1081 tccaaagtgt ctcggttcct gcggccctac aaataaccgg g //