LOCUS BC127186 1573 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens apolipoprotein L, 1, mRNA (cDNA clone MGC:156903 IMAGE:40034503), complete cds. ACCESSION BC127186 VERSION BC127186.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1573) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1573) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCG Plate: 5 Row: d Column: 3. FEATURES Location/Qualifiers source 1..1573 /db_xref="H-InvDB:HIT000389195" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:156903 IMAGE:40034503" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..1573 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" CDS 99..1295 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /codon_start=1 /product="APOL1 protein" /protein_id="AAI27187.2" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" /translation="MEGAALLRVSVLCIWMSALFLGVGVRAEEAGARVQQNVPSGTDT GDPQSKPLGDWAAGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAE LPRNEADELRKALDNLARQMIMKDKNWHDKGQQYRNWFLKEFPRLKSKLEDNIRRLRA LADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITA ALTGITSSTIDYGKKWWTQAQAHDLVIKSLDKLKEVKEFLGENISNFLSLAGNTYQLT RGIGKDIRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVK LTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKIL QADQEL" BASE COUNT 465 a 356 c 436 g 316 t ORIGIN 1 gacgcataac tggaggtggg atccacacag ctcagaacag ctggatcttg ctcagtctct 61 gccaggggaa gattccttgg aggaggccct gcagcgacat ggagggagct gctttgctga 121 gagtctctgt cctctgcatc tggatgagtg cacttttcct tggtgtggga gtgagggcag 181 aggaagctgg agcgagggtg caacaaaacg ttccaagtgg gacagatact ggagatcctc 241 aaagtaagcc cctcggtgac tgggctgctg gcaccatgga cccagagagc agtatcttta 301 ttgaggatgc cattaagtat ttcaaggaaa aagtgagcac acagaatctg ctactcctgc 361 tgactgataa tgaggcctgg aacggattcg tggctgctgc tgaactgccc aggaatgagg 421 cagatgagct ccgtaaagct ctggacaacc ttgcaagaca aatgatcatg aaagacaaaa 481 actggcacga taaaggccag cagtacagaa actggtttct gaaagagttt cctcggttga 541 aaagtaagct tgaggataac ataagaaggc tccgtgccct tgcagatggg gttcagaagg 601 tccacaaagg caccaccatc gccaatgtgg tgtctggctc tctcagcatt tcctctggca 661 tcctgaccct cgtcggcatg ggtctggcac ccttcacaga gggaggcagc cttgtactct 721 tggaacctgg gatggagttg ggaatcacag cagctttgac cgggattacc agcagtacca 781 tagactacgg aaagaagtgg tggacacaag cccaagccca cgacctggtc atcaaaagcc 841 ttgacaaatt gaaggaggtg aaggagtttt tgggtgagaa catatccaac tttctttcct 901 tagctggcaa tacttaccaa ctcacacgag gcattgggaa ggacatccgt gccctcagac 961 gagccagagc caatcttcag tcagtaccgc atgcctcagc ctcacgcccc cgggtcactg 1021 agccaatctc agctgaaagc ggtgaacagg tggagagagt taatgaaccc agcatcctgg 1081 aaatgagcag aggagtcaag ctcacggatg tggcccctgt aagcttcttt cttgtgctgg 1141 atgtagtcta cctcgtgtac gaatcaaagc acttacatga gggggcaaag tcagagacag 1201 ctgaggagct gaagaaggtg gctcaggagc tggaggagaa gctaaacatt ctcaacaata 1261 attataagat tctgcaggcg gaccaagaac tgtgaccaca gggcagggca gccaccagga 1321 gagatatgcc tggcaggggc caggacaaaa tgcaaacttt tttttttttc cgagactcca 1381 tctcaaaaaa aaaaaaaaaa aaagaatata ttgacggaag aatagagagg aggcttgaag 1441 gaaccagcaa tgagaaggcc aggaaaagaa agagctgaaa atggagaaag cccaagagtt 1501 agaacagttg gatacaggag aagaaacagc ggctccacta cagacccagc cccaggttca 1561 atgtcagtaa tta //