LOCUS BC127096 3536 bp mRNA linear HUM 20-JUL-2007
DEFINITION Homo sapiens teashirt zinc finger homeobox 3, mRNA (cDNA clone
MGC:150649 IMAGE:40123925), complete cds.
ACCESSION BC127096
VERSION BC127096.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3536)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: n Column: 16.
FEATURES Location/Qualifiers
source 1..3536
/db_xref="H-InvDB:HIT000389154"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150649 IMAGE:40123925"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CGCCTAAA sequenced from
the forward primer"
gene 1..3536
/gene="TSHZ3"
/gene_synonym="TSH3"
/db_xref="GeneID:57616"
/db_xref="HGNC:HGNC:30700"
CDS 27..2723
/gene="TSHZ3"
/gene_synonym="TSH3"
/codon_start=1
/product="teashirt zinc finger homeobox 3"
/protein_id="AAI27097.1"
/db_xref="GeneID:57616"
/db_xref="HGNC:HGNC:30700"
/translation="MLPEPSLFSTVQLYRQSSKLYGSIFTGASKFRCKDCSAAYDTLV
ELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFE
SLQDLSVHMIKTKHYQKVPLKEPVTPVAAKIIPATRKKASLELELPSSPDSTGGTPKA
TISDTNDALQKNSNPYITPNNRYGHQNGASYAWHFEARKSQILKCMECGSSHDTLQEL
TAHMMVTGHFIKVTNSAMKKGKPIVETPVTPTITTLLDEKVQSVPLAATTFTSPSNTP
ASISPKLNVEVKKEVDKEKAVTDEKPKQKDKPGEEEEKCDISSKYHYLTENDLEESPK
GGLDILKSLENTVTSAINKAQNGTPSWGGYPSIHAAYQLPNMMKLSLGSSGKSTPLKP
MFGNSEIVSPTKNQTLVSPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKMKEPDG
KLSPPKRATPSPCSSEVGEPIKMEASSDGGFRSQENSPSPPRDGCKDGSPLAEPVENG
KELVKPLASSLSGSTAIITDHPPEQPFVNPLSALQSVMNIHLGKAAKPSLPALDPMSM
LFKMSNSLAEKAAVATPPPLQSKKADHLDRYFYHVNNDQPIDLTKGKSDKGCSLGSVL
LSPTSTAPATSSSTVTTAKTSAVVSFMSNSPLRENALSDISDMLKNLTESHTSKSSTP
SSISEKSDIDGATLEEAEESTPAQKRKGRQSNWNPQHLLILQAQFAASLRQTSEGKYI
MSDLSPQERMHISRFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDC
ASQIRTPSTYISHLESHLGFRLRDLSKLSTEQINSQIAQTKSPSEKMVTSSPEEDLGT
SYQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLLYVSELEKQ"
BASE COUNT 956 a 979 c 832 g 769 t
ORIGIN
1 cgctgcagca ggtgtcacag agccgcatgc tcccggagcc cagcctcttc agcaccgtgc
61 agctgtaccg gcagagcagc aagctctatg gctccatctt cacgggggcc agcaagttcc
121 gctgtaagga ctgcagcgct gcctacgaca ccctggtgga gttgacggtg cacatgaacg
181 agacggggca ttaccgcgac gacaaccatg agaccgataa caacaacccc aagcgctggt
241 ccaagcctcg caaacgctcc ttgctggaaa tggaagggaa ggaagacgcc cagaaggtgc
301 tgaagtgcat gtactgtggc cactcctttg agtccctgca ggatttgagt gtccatatga
361 tcaaaacaaa acactaccaa aaagtgcctc tgaaggaacc cgtcactcct gtcgccgcca
421 aaatcatccc tgccactcgg aagaaagctt ccctggagct ggagctcccc agctccccag
481 attccacagg tggaaccccc aaagccacca tctcagacac caacgatgca cttcagaaga
541 actccaaccc ttacatcacg ccaaataatc ggtacggcca ccagaatggg gccagctatg
601 catggcactt tgaggcccgg aagtcgcaga tcctgaagtg catggagtgt gggagctcgc
661 atgacaccct gcaggagctc actgcccaca tgatggtcac tggccacttc atcaaggtca
721 ccaactctgc tatgaaaaag gggaagccca ttgtggagac gcctgtcaca cctaccatca
781 caaccctgct ggatgagaag gtccagtccg tgcccctggc agccaccacc ttcacgtccc
841 cctccaatac acctgccagc atctccccaa aactgaatgt ggaggtcaag aaggaagtcg
901 acaaggagaa agcggtcact gacgagaaac ctaagcaaaa agacaagcct ggcgaagaag
961 aggagaagtg tgacatctct tccaaatacc attacttgac tgaaaatgac ttagaagaga
1021 gtcccaaggg ggggcttgat atcctcaaat ccttggaaaa cacagtgaca tccgcaatca
1081 acaaggccca gaacggcact cctagctggg ggggctatcc cagcatccat gccgcctacc
1141 aacttcccaa catgatgaag ttgtccctgg gctcgtcggg gaagagcacg cccctgaaac
1201 ccatgtttgg caacagtgag attgtctccc cgacgaaaaa ccagaccctg gtctctccac
1261 ccagcagcca gacgtccccc atgcccaaga caaactttca tgccatggag gagctggtga
1321 aaaaggtcac tgagaaagtt gccaaagtgg aggagaagat gaaggagccg gatgggaagc
1381 tttccccgcc caagcgggcc actccctccc catgtagcag cgaagtcggg gaacccatca
1441 agatggaggc atccagcgat gggggcttcc gcagccagga gaacagcccc agccccccgc
1501 gggatgggtg caaggatggg agccccctcg ctgagccggt ggagaatggc aaggagctgg
1561 tgaagcccct agccagcagt ttgagtggca gcacggccat catcaccgac cacccgcctg
1621 aacagccttt tgttaaccct ttgagcgccc tgcagtcagt catgaacatt cacctgggca
1681 aggccgccaa gccctccctg cctgccctgg accccatgag catgcttttc aagatgagca
1741 acagcctggc ggagaaggcc gctgtggcca ccccgccgcc cctgcagtcc aagaaggcag
1801 accacctcga ccgctatttc taccacgtca acaacgacca gcccatagac ttgacaaaag
1861 ggaagagtga caaaggctgc tccttgggtt cagtgcttct gtcacccacg tccacagccc
1921 cggcaacctc ctcatccacg gtgacaacgg caaagacatc tgccgtcgta tcattcatgt
1981 caaactcgcc gctacgcgag aatgccttgt cagatatatc cgatatgctg aagaacttga
2041 cagagagcca cacgtcaaaa tcctccactc cttccagcat ctccgagaag tctgacattg
2101 acggggccac tctggaggag gctgaggagt cgacgcccgc ccagaagagg aagggccgcc
2161 agtcaaactg gaacccccag cacctcctga tcctccaggc ccagtttgcc gccagcctcc
2221 ggcagacctc agaagggaag tacatcatgt cagacctgag cccccaggag cggatgcata
2281 tctccaggtt caccgggctg tccatgacca ccatcagcca ctggctggcc aacgtgaaat
2341 accagcttcg aaggacaggt ggaacaaagt tcctcaaaaa cttggacact ggccaccccg
2401 tcttcttttg taacgattgt gcgtcccaaa tcaggactcc ttccacgtac atcagtcacc
2461 tagagtcaca cttaggcttc cggctacggg acttatccaa actgtccacc gaacagatta
2521 acagtcagat agcacaaacc aagtcaccgt cagaaaaaat ggtgacgtcc tcccccgagg
2581 aagacctggg gacttcctat cagtgcaaac tttgcaatcg gacctttgcc agcaagcacg
2641 ctgttaaact tcaccttagc aaaacacacg ggaaatctcc ggaagaccac cttctgtatg
2701 tctctgagtt agagaagcag tagcatttgc ttttgataga aaggactgca gtttgctttg
2761 agggaaactg tggaaggcac cttcaggccc cctctgactt gttgttcttg gcacatgttc
2821 ttattttaac tgcagagaat cactctgggc tggactgttt tgtataactg tacagtgttt
2881 aatagaggtg cataatcagc tgttgttact ggtaaaatat gaaggttaaa atgcagtggt
2941 aagtgtttgg aactttgtgt aaacgggatt tagttgtgag catcctcccg atgcttcaag
3001 ctgcatgcat taacagacag tttaattaag catttataac ggaatcaggc acaccttttc
3061 cacgagactc gagtgtgctg gcatttctca ccctttcatc tttagccctc tgagtacttt
3121 gaagcacttt tgcattaatt tggttaaaaa ataaaataaa ataataataa tgtatgaagc
3181 tctgtttttt aaactcctta ccagcttagt tataatgaat aatatgaacc tccatttatg
3241 caggtctgca ggggtataac acgccttgaa atttaaaaga atattatttt cacattgaaa
3301 catagatgta tatattgtat agatttcaga ctctcttatg aaaaaaaatg tgattgtggt
3361 taaatgacct ttttcttgca tttatagcaa cagtgtttta tgcacctgct atgctctggg
3421 cataagctgt gcctatgtat agtgtatatt tctttttttc ttttttttaa ggtctatggg
3481 ttttgttttt tacatgcaaa cattgtaaat tatacagaag ataccacaga tagcat
//