LOCUS BC126461 2011 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens cylicin, basic protein of sperm head cytoskeleton 1,
mRNA (cDNA clone MGC:161739 IMAGE:8992177), complete cds.
ACCESSION BC126461
VERSION BC126461.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: O Column: 23.
FEATURES Location/Qualifiers
source 1..2011
/db_xref="H-InvDB:HIT000389053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161739 IMAGE:8992177"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGACCACA"
gene 1..2011
/gene="CYLC1"
/gene_synonym="CYCL1"
/db_xref="GeneID:1538"
/db_xref="HGNC:HGNC:2582"
/db_xref="MIM:603121"
CDS 22..1977
/gene="CYLC1"
/gene_synonym="CYCL1"
/codon_start=1
/product="cylicin, basic protein of sperm head
cytoskeleton 1"
/protein_id="AAI26462.1"
/db_xref="GeneID:1538"
/db_xref="HGNC:HGNC:2582"
/db_xref="MIM:603121"
/translation="MSLPRLLKVNIRTYDNSIPISESSRKSWNQKHFALTFPKPLQRG
TNDKSRPLKSQITVTRHDKRKLEEGQKPAHKWIRHSFRKILQWPPIYTAAREQTPFRH
LYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSYATNPESKQIVEEKTKRQNEADK
TPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKN
NPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNY
SLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTD
AESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASK
NDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEP
KGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKD
IKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKIDESDGTSA
NSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVPPSREKPPLPACEPSLPSPKVRRL
CWCKMPPPPPKPRYAPLPEAPWIHKLL"
BASE COUNT 883 a 330 c 391 g 407 t
ORIGIN
1 ggcaacgtac aggcagggga aatgtctctt ccaaggttgc taaaagtaaa catcagaaca
61 tatgataatt ccattccaat cagtgaatca agcagaaaat catggaatca aaaacacttt
121 gctttgacat ttcccaaacc actccagaga ggtacaaatg ataaatcaag acctttgaaa
181 tcacaaataa cagttactag acatgacaaa agaaaactag aagaaggcca gaaaccagct
241 cataaatgga taaggcattc tttcagaaaa attttgcaat ggccacccat ttacacagct
301 gccagggaac agactccatt cagacatctt tatacttcca aaacccatct taaaaaagca
361 gaatataaaa agtccaaaga tgaaaaagga ggaacacctt tgaagaaaga ttccaagaaa
421 aaaggaggtt catatgcaac aaatccagaa tccaagcaaa tagtagaaga gaaaactaaa
481 agacaaaatg aggcagataa aactccctta aaatcatcac atgaaaatga acaatccaag
541 aagtcaaaat ccagttcaga aactaatcca gaatcccaaa attctaagac agtctcaaaa
601 aattgttcac aaaaagataa gaaagattca aagaattcca agaagacaaa cactgaattc
661 ctacatacaa agaacaatcc aaagaaagat ttgaagaggt caaagactag taatgatccc
721 atatcagaga tttgctcaga aaatagttta aatgttgatt tcctcatgtt agtgggacag
781 tctgatgatg aatccataaa ttttgatgca tggttaagga attactcaca gaataattca
841 aagaattatt ctttgaagta tacaaagtat acaaagaagg acacaaaaaa gaatgcaaag
901 aaaagctctg atgctgaatc tgaagactca aaggatgcta agaaagattc aaagaaagtt
961 aagaaaaatg tcaagaaaga tgacaagaaa aaggatgtaa agaaggacac agagtctact
1021 gatgctgaat ctggagactc aaaggatgaa aggaaagata caaagaagga taagaaaaaa
1081 ttaaagaaag atgacaagaa aaaggacaca aagaagtacc cagagtctac tgatactgaa
1141 tcaggagatg caaaggatgc aagaaatgat tcaagaaatt tgaagaaagc ttcaaagaat
1201 gatgacaaga aaaaggatgc aaagaaaatt acattctcta ctgattctga atctgaactg
1261 gagtcaaagg agagtcagaa agatgaaaaa aaggataaaa aagattcaaa gacagataat
1321 aaaaagtctg tcaagaatga tgaagagtct actgatgctg actctgaacc gaagggagat
1381 tcaaaaaagg gtaaaaagga tgaaaagaag gggaagaaag attcaaagaa agatgacaaa
1441 aagaaggatg caaagaaaaa tgcagaatct actgaaatgg aatctgattt ggagttaaag
1501 aaggacaaga aacactcaaa ggaaaagaaa ggttcaaaga aagatatcaa gaaggatgca
1561 agaaaggaca cagagtctac tgatgctgaa tttgatgaat cttccaagac aggctttaaa
1621 acatctacaa aaatcaaagg ttcagatact gaatctgaag agtcactata taaacctggg
1681 gctaagaaga aaattgatga atcagatggc acatctgcaa attcaaagat ggaaggactg
1741 gaatcaaaga gaggattcag aatgtcatcc aaaaagacta cattcaatga aaaaggggaa
1801 aaagcaagta caggtagagt tcctccatca agagaaaaac caccactccc tgcttgtgag
1861 ccttctctac catcaccaaa ggtcagacgt ctttgttggt gcaagatgcc tcctccacct
1921 ccaaaaccaa gatatgctcc tttgcctgaa gcaccgtgga ttcataagct gctttaaaga
1981 acaactgagc acttggtttc acagaatggc c
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