LOCUS BC126449 1197 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens LSM11, U7 small nuclear RNA associated, mRNA (cDNA
clone MGC:161727 IMAGE:8992165), complete cds.
ACCESSION BC126449
VERSION BC126449.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1197)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: O Column: 11.
FEATURES Location/Qualifiers
source 1..1197
/db_xref="H-InvDB:HIT000389041"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161727 IMAGE:8992165"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AACCCCTG"
gene 1..1197
/gene="LSM11"
/gene_synonym="FLJ38273"
/db_xref="GeneID:134353"
/db_xref="HGNC:HGNC:30860"
CDS 57..1139
/gene="LSM11"
/gene_synonym="FLJ38273"
/codon_start=1
/product="LSM11, U7 small nuclear RNA associated"
/protein_id="AAI26450.1"
/db_xref="GeneID:134353"
/db_xref="HGNC:HGNC:30860"
/translation="MEERERGARSAGAGSPARPPSPRLDVSSDSFDPLLALYAPRLPP
IPYPNAPCFNNVAEYESFLRTGVRGGGRGRGRARGAAAGSGVPAAPGPSGRTRRRPDA
PAPDPERIQRLRRLMVAKEEGDGAAGAGRRGPGRSRKAPRNVLTRMPLHEGSPLGELH
RCIREGVKVNVHIRTFKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDS
SLTLTRLFDRLKLQDSSKKEADSKSAVEDSTLSRYSQTSTWKLASVWGRADTGRGSHK
RSRSVPSSLQASAREESRSELSGRTTRTDGSSVGGTFSRATTLSRGQSRKKKRKPKVD
YQQVFTRHINQIFIRGENVLLVHLAQ"
BASE COUNT 232 a 362 c 368 g 235 t
ORIGIN
1 cctctggcgg cttcgttcct tcttcccatc ggcctcggct tgcgggcctt tcaaacatgg
61 aggagcggga gcggggggcg aggtcggctg gcgccgggag ccccgcgcgc ccgcccagcc
121 cgcggctgga tgtcagctct gacagcttcg acccgctgct ggccctgtac gcgccccgcc
181 tgcctcccat tccctacccc aatgccccct gcttcaacaa cgtggcggag tacgagagct
241 tcctcaggac cggagtccgg ggcggcgggc gcgggcgcgg gcgggctcgg ggcgcggccg
301 cgggctctgg ggttcccgcc gcacccgggc cctcgggcag gactcgtcgc cgcccggacg
361 cgcccgcccc ggaccccgag cgcatccagc gcctccgccg tctcatggtg gccaaagagg
421 aaggggacgg ggccgcagga gcgggccgga ggggtccggg tcggagcagg aaggcgccac
481 gcaacgtgct cacgcgaatg cccttgcacg aaggcagccc tctgggtgaa ctccatcgct
541 gtatccgtga gggggtgaag gtgaatgttc acatccgcac tttcaaggga cttcggggcg
601 tctgtacagg cttccttgtt gcattcgaca agttctggaa tatggcactt actgatgtgg
661 atgagaccta ccgaaaacct gtcctaggca aagcatatga acgggattct tcactgactc
721 tcactaggct atttgatcgg ctgaaacttc aagattcctc caagaaggaa gcagattcta
781 agtctgcagt tgaagattcc actctgtcta gatactcaca gacatccact tggaagttgg
841 cttcagtgtg gggaagagca gacactggcc ggggctcaca caagcgttcc cgctctgtcc
901 cttcttccct gcaggcctct gcaagggagg agtccaggtc agagctgtca gggaggacta
961 cacggacaga cggctccagt gtgggaggta ccttttccag ggctaccacc ctttccagag
1021 gccagtcccg taagaaaaag cgaaagccca aagtggatta ccagcaggta ttcactcgac
1081 acataaatca gattttcatt cgaggcgaga atgtcctgct ggttcatctt gcacagtgac
1141 cagctcagcc tgagctttgg tttttagaaa taaagtgcat gaattgctgc tatgctg
//