LOCUS BC126426 2459 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens BRCA1 associated RING domain 1, mRNA (cDNA clone MGC:161704 IMAGE:8992142), complete cds. ACCESSION BC126426 VERSION BC126426.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2459) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2459) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: N Column: 12. FEATURES Location/Qualifiers source 1..2459 /db_xref="H-InvDB:HIT000389018" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161704 IMAGE:8992142" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TGGAGACT" gene 1..2459 /gene="BARD1" /db_xref="GeneID:580" /db_xref="HGNC:HGNC:952" /db_xref="MIM:601593" CDS 71..2404 /gene="BARD1" /codon_start=1 /product="BRCA1 associated RING domain 1" /protein_id="AAI26427.1" /db_xref="GeneID:580" /db_xref="HGNC:HGNC:952" /db_xref="MIM:601593" /translation="MPDNRQPRNRQPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRL EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLD SMIQLCSKLRNLLHDNELSDLKEDKPRKSLFNDAGNKKNSIKMWFSPRSKKVRYVVSK ASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQKW NLEAEKEDGEFDSKEESKQKLVSFCSQPSVISSPQINGEIDLLASGSLTESECFGSLT EVSLPLAEQIESPDTKSRNEVVTPEKVCKNYLTSKKSLPLENNGKRGHHNRLSSPISK RCRTSILSTSGDFVKQTVPSENIPLPECSSPPSCKRKVGGTSGRKNSNMSDEFISLSP GTPPSTLSSSSYRRVMSSPSAMKLLPNMAVKRNHRGETLLHIASIKGDIPSVEYLLQN GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVD IVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSASHCSVMNTGQRR DGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGI LNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGT FKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYE DLCNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS" BASE COUNT 742 a 512 c 578 g 627 t ORIGIN 1 cttccctgtg gtttcccgag gcttccttgc ttcccgctct gcgaggagcc tttcatccga 61 aggcgggacg atgccggata atcggcagcc gaggaaccgg cagccgagga tccgctccgg 121 gaacgagcct cgttccgcgc ccgccatgga accggatggt cgcggtgcct gggcccacag 181 tcgcgccgcg ctcgaccgcc tggagaagct gctgcgctgc tcgcgttgta ctaacattct 241 gagagagcct gtgtgtttag gaggatgtga gcacatcttc tgtagtaatt gtgtaagtga 301 ctgcattgga actggatgtc cagtgtgtta caccccggcc tggatacaag acttgaagat 361 aaatagacaa ctggacagca tgattcaact ttgtagtaag cttcgaaatt tgctacatga 421 caatgagctg tcagatttga aagaagataa acctaggaaa agtttgttta atgatgcagg 481 aaacaagaag aattcaatta aaatgtggtt tagccctcga agtaagaaag tcagatatgt 541 tgtgagtaaa gcttcagtgc aaacccagcc tgcaataaaa aaagatgcaa gtgctcagca 601 agactcatat gaatttgttt ccccaagtcc tcctgcagat gtttctgaga gggctaaaaa 661 ggcttctgca agatctggaa aaaagcaaaa aaagaaaact ttagctgaaa tcaaccaaaa 721 atggaattta gaggcagaaa aagaagatgg tgaatttgac tccaaagagg aatctaagca 781 aaagctggta tccttctgta gccaaccatc tgttatctcc agtcctcaga taaatggtga 841 aatagactta ctagcaagtg gctccttgac agaatctgaa tgttttggaa gtttaactga 901 agtctcttta ccattggctg agcaaataga gtctccagac actaagagca ggaatgaagt 961 agtgactcct gagaaggtct gcaaaaatta tcttacatct aagaaatctt tgccattaga 1021 aaataatgga aaacgtggcc atcacaatag actttccagt cccatttcta agagatgtag 1081 aaccagcatt ctgagcacca gtggagattt tgttaagcaa accgtgccct cagaaaatat 1141 accattgcct gaatgttctt caccaccttc atgcaaacgt aaagttggtg gtacatcagg 1201 gaggaaaaac agtaacatgt ccgatgaatt cattagtctt tcaccaggta caccaccttc 1261 tacattaagt agttcaagtt acaggcgagt gatgtctagt ccctcagcaa tgaagctgtt 1321 gcccaatatg gctgtgaaaa gaaatcatag aggagagact ttgctccata ttgcttctat 1381 taagggcgac ataccttctg ttgaatacct tttacaaaat ggaagtgatc caaatgttaa 1441 agaccatgct ggatggacac cattgcatga agcttgcaat catgggcacc tgaaggtagt 1501 ggaattattg ctccagcata aggcattggt gaacaccacc gggtatcaaa atgactcacc 1561 acttcacgat gcagccaaga atgggcacgt ggatatagtc aagctgttac tttcctatgg 1621 agcctccaga aatgctgtta atatatttgg tctgcggcct gtcgattata cagatgatga 1681 aagtatgaaa tcgctattgc tgctaccaga gaagaatgaa tcatcctcag ctagccactg 1741 ctcagtaatg aacactgggc agcgtaggga tggacctctt gtacttatag gcagtgggct 1801 gtcttcagaa caacagaaaa tgctcagtga gcttgcagta attcttaagg ctaaaaaata 1861 tactgagttt gacagtacag taactcatgt tgttgttcct ggtgatgcag ttcaaagtac 1921 cttgaagtgt atgcttggga ttctcaatgg atgctggatt ctaaaatttg aatgggtaaa 1981 agcatgtcta cgaagaaaag tatgtgaaca ggaagaaaag tatgaaattc ctgaaggtcc 2041 acgcagaagc aggctcaaca gagaacagct gttgccaaag ctgtttgatg gatgctactt 2101 ctatttgtgg ggaaccttca aacaccatcc aaaggacaac cttattaagc tcgtcactgc 2161 aggtgggggc cagatcctca gtagaaagcc caagccagac agtgacgtga ctcagaccat 2221 caatacagtc gcataccatg cgagacccga ttctgatcag cgcttctgca cacagtatat 2281 catctatgaa gatttgtgta attatcaccc agagagggtt cggcagggca aagtctggaa 2341 ggctccttcg agctggttta tagactgtgt gatgtccttt gagttgcttc ctcttgacag 2401 ctgaatatta taccagatga acatttcaaa ttgaatttgc acggtttgtg agagcccag //