LOCUS BC126420 1568 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens ring finger protein 135, mRNA (cDNA clone MGC:161698
IMAGE:8992136), complete cds.
ACCESSION BC126420
VERSION BC126420.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1568)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1568)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: N Column: 6.
FEATURES Location/Qualifiers
source 1..1568
/db_xref="H-InvDB:HIT000389012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161698 IMAGE:8992136"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCGCGGAG"
gene 1..1568
/gene="RNF135"
/gene_synonym="L13"
/gene_synonym="MGC13061"
/db_xref="GeneID:84282"
/db_xref="HGNC:HGNC:21158"
CDS 91..1389
/gene="RNF135"
/gene_synonym="L13"
/gene_synonym="MGC13061"
/codon_start=1
/product="ring finger protein 135"
/protein_id="AAI26421.1"
/db_xref="GeneID:84282"
/db_xref="HGNC:HGNC:21158"
/translation="MAGLGLGSAVPVWLAEDDLGCIICQGLLDWPATLPCGHSFCRHC
LEALWGARDARRWACPTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQAGSDPAHCP
CPGSSSLSSAAARPRRRPELQRVAVEKSITEVAQELTELVEHLVDIVRSLQNQRPLSE
SGPDNELSILGKAFSSGVDLSMASPKLVTSDTAAGKIRDILHDLEEIQEKLQESVTWK
EAPEAQMQGELLEAPSSSSCPLPDQSHPALRRASRFAQWAIHPTFNLKSLSCSLEVSK
DSRTVTVSHRPQPYRWSCERFSTSQVLCSQALSSGKHYWEVDTRNCSHWAVGVASWEM
SRDQVLGRTMDSCCVEWKGTSQLSAWHMVKETVLGSDRPGVVGIWLNLEEGKLAFYSV
DNQEKLLYECTISASSPLYPAFWLYGLHPGNYLIIKQVKV"
BASE COUNT 332 a 461 c 451 g 324 t
ORIGIN
1 agggcaaggg gaagaggaag ggcgagggag gagcctgagg agactcgccc ggctcaaccc
61 cgacgtccgc gccccggccg cctgttggcc atggcgggcc tgggcctggg ctccgccgtt
121 cccgtgtggc tggccgagga cgacctcggc tgcatcatct gccaggggct gctggactgg
181 cccgccacgc tgccctgcgg ccacagcttc tgccgccact gcctggaggc cctgtggggc
241 gcccgcgacg cccgccgctg ggcctgcccc acttgccgcc agggcgccgc gcagcagccg
301 cacctgcgga agaacacgct actgcaggac ctggccgaca agtaccgccg cgccgcacgc
361 gagatacagg cgggctccga ccctgcccac tgcccctgcc cgggctccag ttccctctcc
421 agcgcggccg cgaggccccg gcgccgcccg gaactgcagc gggtggcagt agagaagagc
481 atcacagaag ttgctcagga gctgacagag ctggtggaac atcttgtaga cattgtcaga
541 agcctgcaga atcagaggcc cctatcagaa tctggaccag acaacgaact gagcatcctg
601 ggcaaggctt tttcttctgg ggtggatctt tccatggctt ctccaaagct ggtgacttcc
661 gacacagctg cagggaaaat cagagatatt ctccatgacc tagaagaaat tcaggaaaaa
721 ttacaagaaa gcgtcacctg gaaagaggct cctgaagcac aaatgcaggg agaactcctg
781 gaagccccgt cttcctcctc atgcccattg cctgaccaga gccaccctgc actcaggaga
841 gcttctcggt ttgctcagtg ggccatccat ccaaccttta acttgaagag cctttcctgc
901 agcctggagg tgtccaagga ttcccgtaca gtgactgtgt ctcaccgccc acaaccctat
961 cgctggagct gtgagaggtt ttctaccagc caggtcttat gttcccaggc cctgtcttct
1021 ggaaagcatt actgggaagt ggacactagg aattgcagcc actgggcagt tggggtggct
1081 tcctgggaga tgagccgcga ccaggtcctg ggaaggacta tggactcttg ttgtgtggaa
1141 tggaagggga ctagccagct ctctgcatgg cacatggtca aggaaactgt ccttggctca
1201 gacagacctg gggtggtggg catctggctg aaccttgagg agggaaagct tgccttctat
1261 tcagtggaca atcaggagaa gcttctgtat gagtgtacca tctctgcctc ctctcctttg
1321 taccctgcct tctggctgta tggcttacat cctggaaatt acctgataat aaagcaagta
1381 aaggtgtaag gtttcctaag ggattacaac acagtggttt cctggtctct ctccctgtca
1441 tcaatcaggg tagtaacttg acttaagaat accacttttt agaaaaatta cgatagagat
1501 gggatctcac taggttgccc aggctggtgt cgaattcctg gtctcaagca gtcctcccac
1561 ctcagcct
//