LOCUS BC126417 2288 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens lymphoid-restricted membrane protein, mRNA (cDNA clone
MGC:161695 IMAGE:8992133), complete cds.
ACCESSION BC126417
VERSION BC126417.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2288)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: N Column: 3.
FEATURES Location/Qualifiers
source 1..2288
/db_xref="H-InvDB:HIT000389009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161695 IMAGE:8992133"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CAAAATAC"
gene 1..2288
/gene="LRMP"
/gene_synonym="JAW1"
/db_xref="GeneID:4033"
/db_xref="HGNC:HGNC:6690"
/db_xref="MIM:602003"
CDS 602..2101
/gene="LRMP"
/gene_synonym="JAW1"
/codon_start=1
/product="lymphoid-restricted membrane protein"
/protein_id="AAI26418.1"
/db_xref="GeneID:4033"
/db_xref="HGNC:HGNC:6690"
/db_xref="MIM:602003"
/translation="MNDDPSMEENGVERVCPESLLQSREYSSLPLPRHTSSTDGTITS
SDPGLEILNMASCDLDRNSLCKKEEDTRSASPTIEAQGTSPAHDNIAFQDSTSKDKTI
LNLEAKEEPETIEEHKKEHASGDSVVSPLPVTTVKSVNVRQSENTSANEKEVEAEFLR
LSLGFKCDWFTLEKRVKLEERSRDLAEENLKKEITNSLKLLESLTPLCEDDNQAQEII
KKLEKSIKFLSQCAARVASRAEMLGAINQESRVSKAVEVMIQHVENLKRMYAKEHAEL
EELKQVLLQNERSFNPLEDDDDCQIKKRSASLNSKPSSLRRVTIASLPRNIGNAGMVA
GMENNDRFSRRSSSWRILGSKQSEHRPSLPRFISTYSWADAEEEKCELKTKDDSEPSG
EETVERTRKPSLSEKKNNPSKWDVSSVYDTIASWATNLKSSIRKANKALWLSIAFIVL
FAALMSFLTGQLFQKSVDAAPTQQEDSWTSLEHILWPFTRLRHNGPPPV"
BASE COUNT 741 a 487 c 502 g 558 t
ORIGIN
1 tgctttcttt cctggccaca ctgctacaat ccagcactaa ctatccatgt ccagggtaag
61 gatcgagatc gagaagccca cactgccagt gaaaaagcta cgtctttact gcataaatta
121 gaggaagcaa tttcggaaca acggaacctt caaactataa atactgaatt atcgaacact
181 tgccaggcac ttcagcagaa gacaaggaaa ctgaagaagc tttttagatg aggaatttcc
241 tcactatgat tccctgtcct gcgcagatgc aattcaacaa cctcttcaag aaaaattgaa
301 gcagtgttgc cacaaactat atggtggtca agaagcaaga atacatcaga cacccctgac
361 cttgaaacat acgtgctggt acacacctct gctggatgcc ttatctctgg atagttttac
421 agcagttcca accctggaat caacaccttt ctcaggtgta gccaaccaaa tccacactct
481 gtgtgaaagg cccacatatg gagaagtaaa ggatggtgct ttggatgtaa aaagacaaca
541 caagtgccca ggccccacaa gtggccccag cccaggaacg aatctctcag gctgcatcag
601 gatgaatgat gacccaagta tggaagagaa tggtgttgaa cgcgtgtgtc ctgagagcct
661 gctgcagtcc agggaatatt cctcactacc attacccaga cacacttcat cgacagacgg
721 tactataact tcaagtgatc ctggattaga aattctgaat atggcttctt gtgaccttga
781 cagaaactcg ctctgtaaga aagaggagga tacaagatca gcttctccca cgatagaggc
841 ccaaggcaca agtccagctc atgataatat tgcattccaa gactctacga gtaaggataa
901 aaccatatta aatctggaag ccaaagagga accagaaaca atagaagaac ataaaaaaga
961 acatgcttca ggagactctg tggtttcccc tcttcctgta accactgtga aatcggttaa
1021 cgttagacaa agtgagaaca cttctgctaa tgagaaggag gtggaggcag aatttctcag
1081 attatctttg ggatttaagt gtgactggtt taccttggag aagagagtga agcttgaaga
1141 gaggtcccgt gacttggcag aagaaaattt gaagaaagaa atcactaact ctttaaaact
1201 attagagtct ttaacacctc tgtgtgaaga tgacaaccag gcacaggaaa tcattaagaa
1261 gctggagaag agtataaagt ttcttagcca gtgtgcagca cgagtggcca gtagggctga
1321 gatgttggga gccatcaatc aggaaagccg ggttagtaaa gcagttgaag tgatgattca
1381 gcacgtagaa aacttgaaga ggatgtatgc caaagagcac gctgaattag aagaactgaa
1441 acaggttctt ctgcagaatg aaaggtcttt caatcctctt gaagatgatg atgactgcca
1501 aattaaaaaa cgttcagctt ctctaaactc caagccatct tctctacgaa gagtgactat
1561 tgcctcttta cccagaaata ttggaaatgc aggaatggtg gctgggatgg aaaataatga
1621 tcgattcagt agaaggtcaa gcagttggcg tattttgggg tcaaagcaga gtgaacaccg
1681 tccctcatta cctcgattta ttagcaccta ttcctgggca gatgctgaag aagaaaaatg
1741 tgaactaaaa actaaagatg actcagagcc atctggagaa gaaacagtag aaaggacaag
1801 gaagccaagt ctttctgaaa agaaaaataa tccatcaaag tgggatgtct cttcagttta
1861 tgacacaata gcttcctggg caacaaatct caagtcctcc atcagaaagg ctaataaggc
1921 cctctggctc tctattgcat tcattgtact gtttgcagct ttgatgagct tcctcacagg
1981 ccaattattc cagaagtctg tggatgccgc tcccacacag caagaggact catggacgtc
2041 tctagaacat atcttgtggc catttaccag actccgacac aatgggccac caccagtgtg
2101 acagcaggac atcctaatat atggatcttg atttttaagt ttcagtatct gaacttcgta
2161 aattagtaac ttttagctgg gaaagtatag catgaaacca gaggttctca gaatgactgt
2221 aagatagctt acatttcctc tttttgcctt tatctcccca actaaaatac aatggggaag
2281 aagtctgc
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