LOCUS BC126416 765 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A, mRNA (cDNA clone MGC:161694 IMAGE:8992132), complete cds. ACCESSION BC126416 VERSION BC126416.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 765) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 765) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: N Column: 2. FEATURES Location/Qualifiers source 1..765 /db_xref="H-InvDB:HIT000389008" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161694 IMAGE:8992132" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TCCATCCC" gene 1..765 /gene="APOBEC3A" /gene_synonym="ARP3" /gene_synonym="bK150C2.1" /gene_synonym="PHRBN" /db_xref="GeneID:200315" /db_xref="HGNC:HGNC:17343" /db_xref="MIM:607109" CDS 61..660 /gene="APOBEC3A" /gene_synonym="ARP3" /gene_synonym="bK150C2.1" /gene_synonym="PHRBN" /codon_start=1 /product="apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A" /protein_id="AAI26417.1" /db_xref="GeneID:200315" /db_xref="HGNC:HGNC:17343" /db_xref="MIM:607109" /translation="MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGT SVKMDQHRGFLHNQAKNLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCF SWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKH CWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN" BASE COUNT 188 a 214 c 208 g 155 t ORIGIN 1 gccttgagca agtcgcaaga gcgggaggac acagaccagg aaccgagaag ggacaagcac 61 atggaagcca gcccagcatc cgggcccaga cacttgatgg atccacacat attcacttcc 121 aactttaaca atggcattgg aaggcataag acctacctgt gctacgaagt ggagcgcctg 181 gacaatggca cctcggtcaa gatggaccag cacaggggct ttctacacaa ccaggctaag 241 aatcttctct gtggctttta cggccgccat gcggagctgc gcttcttgga cctggttcct 301 tctttgcagt tggacccggc ccagatctac agggtcactt ggttcatctc ctggagcccc 361 tgcttctcct ggggctgtgc cggggaagtg cgtgcgttcc ttcaggagaa cacacacgtg 421 agactgcgta tcttcgctgc ccgcatctat gattacgacc ccctatataa ggaggcactg 481 caaatgctgc gggatgctgg ggcccaagtc tccatcatga cctacgatga atttaagcac 541 tgctgggaca cctttgtgga ccaccaggga tgtcccttcc agccctggga tggactagat 601 gagcacagcc aagccctgag tgggaggctg cgggccattc tccagaatca gggaaactga 661 aggatgggcc tcagtctcta aggaaggcag agacctgggt tgagcagcag aataaaagat 721 cttcttccaa gaaatgcaaa cagaccgttc accaccatct ccagc //