LOCUS BC126412 2528 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens coiled-coil domain containing 81, mRNA (cDNA clone
MGC:161690 IMAGE:8992128), complete cds.
ACCESSION BC126412
VERSION BC126412.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: M Column: 22.
FEATURES Location/Qualifiers
source 1..2528
/db_xref="H-InvDB:HIT000389004"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161690 IMAGE:8992128"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_299"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CACGAAAG"
gene 1..2528
/gene="CCDC81"
/gene_synonym="FLJ16339"
/gene_synonym="FLJ23514"
/db_xref="GeneID:60494"
/db_xref="HGNC:HGNC:26281"
CDS 273..2231
/gene="CCDC81"
/gene_synonym="FLJ16339"
/gene_synonym="FLJ23514"
/codon_start=1
/product="CCDC81 protein"
/protein_id="AAI26413.1"
/db_xref="GeneID:60494"
/db_xref="HGNC:HGNC:26281"
/translation="MLDTIARALQDLGRQVLPTLPSLSQEEVSIIWGNVSEFVRRQLT
LHKGVQIPAFGTFTFIRQKLEVGNNKFILIQRPVFIMVEKLVQIHGLKQNKVYTPGEI
PIVPLNFVMISLEGPFNRDVVEGCVKETLLFLSRSISMKQNVEFTFKGIGVLMIRDSK
VKMRFYKDFLCTMDGSGALAKALANRPGTVDSVLSSREALRKWPSSVLAFPRIELKEM
ENKLPMETLVEECGENRERKCKLKDQSDKEEGTRDISSPKRLRDRQALFPAKVTNVSL
LEKFERSESGGKIMTPESLSYPSCLKHDSEMKPQTSPACQDHNKAGQEMCYVCLQRAQ
RNSLLYYSEERRREIEDERLIQQYQMLKDQEALFRHQMKSLATREQNQKNAAYNLGVA
EAIRNHKNEKPEFYKSFLFDKRPLSPALNALKQEEYSRSLLKQMDNRQENEIKQRQYR
ELMDRLEQVQLTEELAAQRAKFLKDKMEETQCYKRALDAQIKNKPSRLPPFEPDSSEP
IFGKNEGELMVEKQKREQNYMKHQLEAAANHKRKAILHQLVDQRRDLQMLQRTQREHL
ADRTAELERVNRVNQCLQEDWERSAAMKKQRDLEDKAFERASDKLFLLDQCEKYRRCK
QCQRRTSNVGESNLWPLNKFLPGSRLLV"
BASE COUNT 773 a 504 c 661 g 590 t
ORIGIN
1 gtgccggaca tcagttcctg cggctcttgc tgtgggagct gcccgagagc cagagcagtg
61 gggagggacg gcgagaacca atgtttaagt ttatttaaga aagaagaaaa agagtcaaga
121 agttcaagat tttcgtcact cttattttta aggcacatcc aaagctccgt ggagaagggg
181 ctggagggtg ggaaaattat ttttgtgcac attccatata agaaagaaga gacccatcga
241 acattcagta cggagtcacc tggaaattgg agatgttgga tacgatcgcc cgtgccctgc
301 aggacctggg caggcaggtg ctgcccactc tgccctcgct gagccaggag gaagtctcta
361 ttatctgggg gaatgtatca gaatttgtga gacggcagtt aaccctgcac aagggggttc
421 agattccagc atttggaact ttcactttca taagacaaaa gcttgaggtg ggaaacaaca
481 aatttatctt aatccagagg cctgtgttta tcatggtgga gaagctagtg cagatccatg
541 gactcaaaca aaacaaagta tatactcctg gtgaaatccc aattgttcca cttaattttg
601 tcatgatatc cctggagggt ccatttaaca gagatgtagt ggaaggatgt gtgaaggaga
661 cgttgctttt tttatcgcgt tccatttcca tgaaacaaaa tgtggagttt acattcaaag
721 gaattggggt cctcatgatc agagacagca aagtgaagat gaggttttat aaagacttcc
781 tttgtaccat ggatggaagt ggggctttgg caaaggccct agcaaatagg cctggcactg
841 tggactcggt gttgtctagc agagaggcct tgaggaagtg gcccagcagt gtgcttgcgt
901 ttccaaggat tgagctcaag gagatggaaa acaaactgcc tatggagacc cttgtagaag
961 aatgtggaga gaatagagaa aggaagtgca agttaaaaga ccagtcagac aaagaagaag
1021 gcaccagaga tatctcatca cccaaaagac ttcgagatag acaagctttg ttccctgcca
1081 aagtgacaaa tgtcagcttg ctggaaaagt ttgaacgaag tgagagtggt gggaagatta
1141 tgacccctga aagcttatca tatccaagtt gtctgaaaca cgacagtgag atgaagcccc
1201 aaacatctcc agcttgccag gatcataaca aggcaggaca ggaaatgtgc tatgtatgtt
1261 tgcaacgagc acaacgaaat tccctgttgt actacagtga ggaaaggagg agagagatag
1321 aagatgagag actcatacag cagtatcaga tgttaaagga tcaggaggct ctcttcagac
1381 accagatgaa aagtctggct actagagaac agaatcagaa aaatgctgcc tataatcttg
1441 gagttgctga agctataaga aaccacaaga atgagaaacc ggaattttat aaatccttcc
1501 tatttgacaa acggccactc agtcctgcac ttaatgctct taagcaagag gaatattccc
1561 ggagtctcct gaaacaaatg gataacagac aggaaaacga aataaagcaa agacaataca
1621 gagagttgat ggaccgcctg gaacaagtgc aactcacaga ggaacttgct gcgcaaagag
1681 cgaaattttt aaaagataag atggaagaaa cacagtgtta caagagagct ttggatgcac
1741 agataaagaa caaaccctct cggctgcccc cctttgagcc agactcctct gagcccatct
1801 ttggtaagaa tgagggtgaa ctgatggtgg aaaagcaaaa gcgagaacaa aattacatga
1861 aacaccagct ggaggcagct gctaaccaca agaggaaagc catcctgcat caactagtgg
1921 accagaggcg ggatttgcaa atgcttcaga ggacacaaag agagcacttg gcagacagaa
1981 ccgctgagct ggagcgagta aatagagtca accaatgctt acaggaggac tgggaaagga
2041 gtgctgcgat gaagaagcag cgagacctgg aggacaaggc ttttgaacgg gcttcagaca
2101 agctgtttct cctagaccag tgtgagaagt atcggcgctg caagcaatgc cagaggcgca
2161 cctccaacgt gggcgagagc aacctgtggc ccctgaacaa gttcctgcct ggctcccggt
2221 tgcttgtgta aaactcaaag tttggctctt cgtttcctgg ggaaagtttt tatcttttac
2281 atgtttgggg gtgattgtga aactgcgtat ttttacctca gagaaaaaaa tcattgttta
2341 ggtttggtgc tttcattaga ttgcttgtta agcccttatt gaattcactc ctgctttcct
2401 cccaccccca attatttcct atactagttt ctgatggcag tgaaggtgtc tgaatggtcc
2461 tgagggctag aacctgctgc acaggggctg ggaatgggat ccagcttcat tatggctgct
2521 ggggtgct
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