LOCUS BC126394 3905 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 15, mRNA (cDNA clone
MGC:161672 IMAGE:8992110), complete cds.
ACCESSION BC126394
VERSION BC126394.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: M Column: 4.
FEATURES Location/Qualifiers
source 1..3905
/db_xref="H-InvDB:HIT000388986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161672 IMAGE:8992110"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_299"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AACACCTA"
gene 1..3905
/gene="C3orf15"
/gene_synonym="AAT1"
/gene_synonym="AAT1alpha"
/db_xref="GeneID:89876"
/db_xref="HGNC:HGNC:24010"
/db_xref="MIM:609910"
CDS 66..2369
/gene="C3orf15"
/gene_synonym="AAT1"
/gene_synonym="AAT1alpha"
/codon_start=1
/product="chromosome 3 open reading frame 15"
/protein_id="AAI26395.1"
/db_xref="GeneID:89876"
/db_xref="HGNC:HGNC:24010"
/db_xref="MIM:609910"
/translation="MSHAVTIEEPQAQPQVSQTRYRERSRAGSHISSNRAYDFLYDPL
FIVSSEKDHTQANIQATLIRSRLRKVPRFKTMFSNLIHYPRYSLYWSKSDPVPPFISR
EWKGHKEKHREALRQLTTTDASFQMPKEVYEDPEVTGKNRYKYFERPFLPFFQQMPFN
VVYAVSKAEPYTFPPTSTKHLSIPSKSTVGTQTDYRDADVQTDPYSPEYVVCQDSIPE
LLTLATLTWGRGLPAGQAEVEMIERAREKRAWEASLPALSDTSQFEKRRKMMNEMERK
EWAFREQEIEKLQEIRLEVLKELLRKREENQNEVNMKHLNARWSKLQEGKEAKMAKIQ
RTHVSTIRKLVGKRKNIEGKLERRNIIKDYSDYASQVYGPLSRLGCFPDNNSEDFVVK
NYYLNTYEGLVELESCLPDFVTQPQIRAPKPKVITTKAGFLKRAARLDYELAEVHKAL
LDKKNKVLEVKKPPRFLQRNPIPQPRLPTPTLEMTSNEEEEMEMAVIYLQKLLRGRVV
QNMMFEGKEKRLELIQELRTCHALQEDEKLVKKAEKQVTLALQRQRNLHEHKVSLVEN
HLAGLEGRALADMFDFLSKELVRLQEERRIHAFVMLAERQRRVREAEESGRRQVEKQR
LREEDEIFKEVVKVHHSTISSYLEDIILNTEANTAEEQARAEIEKMAEKINDIAYEME
SRRTYLQSEEIVAELVYSFLIPEVQKYFVKEKVRNAQRKHILAAHQIIHSYTESMVQK
KLTEGEQDEASNAAMLLEKETQNENNS"
BASE COUNT 1316 a 751 c 900 g 938 t
ORIGIN
1 acgtgcacgc agtagccagg cctgacccgc tggtcccttg ctggcgggag gaaagaggcg
61 gcaccatgag ccacgcagta accatcgagg agccccaggc ccagccgcag gtgtctcaaa
121 ctcggtaccg ggagaggtcg cgggctggga gccacatctc ctccaatcga gcgtatgatt
181 ttctgtacga tccattgttt attgtgtcaa gtgagaaaga ccatacacag gcaaatatcc
241 aagctaccct gattcgcagc agactgagaa aagttcccag gtttaaaacc atgttcagta
301 acctgatcca ttatccaaga tactctctat attggagcaa gtcagatcct gtcccaccat
361 ttatcagtcg ggaatggaag ggacataagg agaaacacag agaagccctc cggcagctca
421 ccacaactga cgcttctttt cagatgccta aagaagttta tgaagatcct gaagttactg
481 gaaagaatcg ctataaatac tttgaaaggc cttttctccc attttttcag cagatgccat
541 tcaatgttgt ttatgccgta tccaaggcag aaccatacac ttttcctcct acttctacta
601 agcacctatc catcccttca aagtctactg tgggcactca gactgattat cgggatgctg
661 acgttcaaac agatccatac tctccagaat atgtagtatg tcaggactca atccctgagc
721 tcttgaccct ggctacgctt acttggggtc ggggtctccc agcaggacaa gctgaggtgg
781 agatgataga aagagcccgc gagaagcgtg cttgggaagc ctctctcccc gctctgagtg
841 acacctccca gtttgagaag aggaggaaaa tgatgaatga aatggagagg aaggagtggg
901 ccttcagaga gcaggagatt gaaaaactgc aggagattcg cctggaagtt ctaaaagagc
961 tgttgaggaa gcgtgaagag aatcagaatg aagtgaatat gaagcacttg aatgcccggt
1021 ggtctaaact gcaggaggga aaagaggcaa aaatggcaaa aattcagcgc acgcatgtat
1081 caacaatcag aaaacttgta ggaaagagaa agaatataga agggaagttg gagagaagaa
1141 atatcatcaa ggattattct gattatgcat cacaggtcta tggacctctg tctcgtcttg
1201 ggtgtttccc agacaacaac tcagaggact ttgtagtaaa aaactactat ctcaacacct
1261 atgaaggatt agtggaactt gagtcatgtc tcccagattt tgtgacacaa ccccaaatca
1321 gagctccaaa acctaaagtc attaccacca aagctggttt tctgaagagg gcagcaaggt
1381 tggactatga gttggcagag gttcataagg cactgttgga taagaagaat aaagttcttg
1441 aagtaaagaa accccctcgc ttccttcaaa gaaacccaat acctcaacct cggcttccaa
1501 ctccaacctt ggaaatgacg tccaatgaag aagaagaaat ggaaatggct gtgatctacc
1561 ttcaaaagtt actccggggc agagtcgttc agaacatgat gtttgaaggg aaagaaaagc
1621 gactggagtt gatccaggag ttgcgcacct gccacgcact acaagaagat gaaaagctgg
1681 tgaaaaaagc cgagaagcaa gtgaccctgg ccttacagcg gcagaggaac ttgcatgagc
1741 acaaggtgtc actggttgaa aaccatttgg ccggactgga aggaagggca ctagcagaca
1801 tgtttgactt cctgtccaaa gagctggtga gactgcagga ggagaggagg atccatgcct
1861 ttgtcatgct ggctgagcgc cagcggcggg tacgagaggc tgaagagagt ggtcggcgcc
1921 aggtggaaaa acagcgcctg cgggaggagg acgagatatt taaggaggtg gttaaagttc
1981 accatagtac tataagctcc tacctagaag acataatact gaataccgaa gcgaatactg
2041 cagaagaaca agccagggca gaaatagaga agatggctga gaaaatcaat gacattgctt
2101 atgaaatgga aagccgccga acctatcttc agtcagagga gattgttgct gagttggttt
2161 atagttttct gatcccagag gtgcaaaaat actttgtcaa agaaaaagtg aggaacgcac
2221 agcggaaaca tattcttgca gcccatcaga tcatccacag ttacacggaa agcatggttc
2281 aaaagaaatt aactgaggga gagcaagatg aggcctcaaa tgctgccatg ttacttgaga
2341 aagaaactca aaatgagaac aacagctaag attgtgattt ttttgtaaaa gaagctgtac
2401 gaatcatcat aaataattcc aatagtctgc acttctccca aggtgtgcac tgctcataaa
2461 cttgccagtg tgtgattcat gagaaaggag atttattttc cttaaacatc caataattta
2521 aaatgatttt caataataat aatcaaatga aaaagcttca ttctcttcag tgtcttctag
2581 atgccctact taaagagaac attttcttat gtctcatttc aatattttgt taactatgag
2641 gatgtgctgg tttgttgaat caaacaaaag gaaatgttgt ggaatatttt tccaagtagt
2701 tttggttcac tattcacagg acattggcat tatctactaa ggctgaaaat gtgcatattc
2761 catgactcag gattttatct cctagatata tattcaacag aaatgcatga gtatgtgcac
2821 caacaggcat gacaaaaata tttatagtag tggtgttcac aatagtccca aactggaaac
2881 ccaagtgtcc atctccatcg gaacagaaaa ctatactttg gtctgcttct acagtggcac
2941 atcaacccac ctttgagctt tagatctaag aagtgtgttc atgcaacagc catagagatg
3001 gtgctattga aaggcaatct gcccatcctg tgtattgaca agcatcagga ttccaggagg
3061 attcttcctg attcaaagac tgtcaaatag gaaaaaagaa aacagtaaat gaacaaaaac
3121 atcaacatgg agtccaagta atgaatttat agaggaaaat gtatgctact ctgaaaacaa
3181 agcttatgtt agagaatatc ttactgtaag aaacaaggaa aattgcagaa acatttgctg
3241 agtgttttta ataggagtca aaaagaaagg gtcttttcag aaactgaagt aggaaataat
3301 aacagacaag gtcaaaaaat agatgcaggc tgaaaagaaa aggaagtggg ctaagatggg
3361 aaaaatataa aaagatttaa aatccagcaa caaaatttac acattcattt ggatgcagtg
3421 aaaagggcag aaataccaca gcagagaata aaattgataa tgttggcaac acatttatta
3481 agtgatccaa catgggatgg gaaggaatgg gcaaagagat taaaatgaca gaagttagct
3541 gtagatgacc tatcccacag caatcggagt tcttgaagaa gaaaccagaa caaataaaat
3601 agaaacaata atcagagttt aataattaat tttctgagtt tttttttaaa aaaactaatt
3661 atacaaactt gaaagggttc accttgccct agcaaaacta ggattgggac accttttttt
3721 ccccctgagg atcactgaca aaaaacactg caccagtaag gaagcaacta aattttgttt
3781 tgttctttga aaaaggctaa cctgagctag gtaaaggtta tatcattcac ttttgaaata
3841 aaccatcgag aacacaaaat gacaagtgag ttaggttggg ctgatgggat agaaggtggg
3901 agggg
//