LOCUS BC126315 3731 bp mRNA linear HUM 05-APR-2007
DEFINITION Homo sapiens mucin 17, cell surface associated, mRNA (cDNA clone
IMAGE:8992031), partial cds.
ACCESSION BC126315
VERSION BC126315.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3731)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3731)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: I Column: 21.
FEATURES Location/Qualifiers
source 1..3731
/db_xref="H-InvDB:HIT000388907"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8992031"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_337"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCAATGT"
gene <1..3731
/gene="MUC17"
/gene_synonym="MUC3"
/db_xref="GeneID:140453"
/db_xref="HGNC:HGNC:16800"
/db_xref="MIM:608424"
CDS <1..3677
/gene="MUC17"
/gene_synonym="MUC3"
/codon_start=3
/product="MUC17 protein"
/protein_id="AAI26316.1"
/db_xref="GeneID:140453"
/db_xref="HGNC:HGNC:16800"
/db_xref="MIM:608424"
/translation="SMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVT
TYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPV
TTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTL
VTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTST
PVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSN
TFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDR
STPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSVTISEAGTASTLPVD
TSTPVITSTQVSSSPVTPEGTTMPIWTPSEGSTPLTTMPVSTTRVTSSEGSTLSTPSV
VTSTPVTTSTEAISSSATLDSTTMSVSMPMEISTLGTTILVSTTPVTRFPESSTPSIP
SVYTSMSMTTASEGSSSPTTLEGTTTMPMSTTSERSTLLTTVLISPISVMSPSEASTL
STPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSERSTPLTTLLVSTTLPTSFPGAS
IASTPPLDTSTTFTPSTDTASTPTIPVATTISVSVITEGSTPGTTIFIPSTPVTSSTA
DVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMST
APSTPRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFP
PAHSSTPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSFPTVTTTAVPTNTTIKSNPTS
TPTVPRTTTCFGDGCQNTASRCKNGGTWDGLKCQCPNLYYGELCEEVVSSIDIGPPET
ISAQMELTVTVTSVKFTEELKNHSSQEFQEFKQTFTEQMNIVYSGIPEYVGVNITKLR
LGSVVVEHDVLLRTKYTPEYKTVLDNATEVVKEKITKVTTQQIMINDICSDMMCFNTT
GTQVQNITVTQYDPEEDCRKMAKEYGDYFVVEYRDQKPYCISPCEPGFSVSKNCNLGK
CQMSLSGPQCLCVTTETHWYSGETCNQGTQKSLVYGLVGAGVVLMLIILVALLMLVFR
SKREVKRQKYRLSQLYKWQEEDSGPAPGTFQNIGFDICQDDDSIHLESIYSNFQPSLR
HIDPETKIRIQRPQVMTTSF"
BASE COUNT 1009 a 1148 c 709 g 865 t
ORIGIN
1 ccagcatgcc aacctcaact cctagtgaag gaagcactcc attaacaagt atgcctgtca
61 gcaccacaac ggtggccagt tctgaaacga gcaccctttc aacaactcct gctgacacca
121 gcacacctgt gaccacttat tctcaagcca gttcatctcc tccaattgct gacggtacta
181 gcatgccaac ctcaacttat agtgaaggaa gcactccact aacaaatatg tctttcagca
241 ccacgccagt ggtcagttct gaggctagca ccctttccac aactcctgtt gacaccagca
301 cacctgtcac cacttctact gaagccagtt tatctcctac aactgctgaa ggtaccagca
361 taccaacctc aagtcctagt gaaggaacca ctccattagc aagtatgcct gtcagcacca
421 cgccggtggt cagttctgag gttaacaccc tttcaacaac tcctgtggac tccaacactc
481 tggtgaccac ttctactgaa gccagttcat ctcctacaat cgctgaaggt accagcttgc
541 caacctcaac tactagtgaa ggaagcactc cattatcaat tatgcctctc agtaccacgc
601 cggtggccag ttctgaggct agcacccttt caacaactcc tgttgacacc agcacacctg
661 tgaccacttc ttctccaacc aattcatctc ctacaactgc tgaagttacc agcatgccaa
721 catcaactgc tggtgaagga agcactccat taacaaatat gcctgtcagc accacaccgg
781 tggccagttc tgaggctagc accctttcaa caactcctgt tgactccaac acttttgtta
841 ccagttctag tcaagccagt tcatctccag caactcttca ggtcaccact atgcgtatgt
901 ctactccaag tgaaggaagc tcttcattaa caactatgct cctcagcagc acatatgtga
961 ccagttctga ggctagcaca ccttccactc cttctgttga cagaagcaca cctgtgacca
1021 cttctactca gagcaattct actcctacac ctcctgaagt tatcaccctg ccaatgtcaa
1081 ctcctagtga agtaagcact ccattaacca ttatgcctgt cagcaccaca tcggtgacca
1141 tttctgaggc tggcacagct tcaacacttc ctgttgacac cagcacacct gtgatcactt
1201 ctacccaagt cagttcatct cctgtgactc ctgaaggtac caccatgcca atctggacgc
1261 ctagtgaagg aagcactcca ttaacaacta tgcctgtcag caccacacgt gtgaccagct
1321 ctgagggtag caccctttca acaccttctg ttgtcaccag cacacctgtg accacttcta
1381 ctgaagccat ttcatcttct gcaactcttg acagcaccac catgtctgtg tcaatgccca
1441 tggaaataag cacccttggg accactattc ttgtcagtac cacacctgtt acgaggtttc
1501 ctgagagtag caccccttcc ataccatctg tttacaccag catgtctatg accactgcct
1561 ctgaaggcag ttcatctcct acaactcttg aaggcaccac caccatgcct atgtcaacta
1621 cgagtgaaag aagcacttta ttgacaactg tcctcatcag ccctatatct gtgatgagtc
1681 cttctgaggc cagcacactt tcaacacctc ctggtgatac cagcacacct ttgctcacct
1741 ctaccaaagc cggttcattc tccatacctg ctgaagtcac taccatacgt atttcaatta
1801 ccagtgaaag aagcactcca ttaacaactc tccttgtcag caccacactt ccaactagct
1861 ttcctggggc cagcatagct tcgacacctc ctcttgacac aagcacaact tttacccctt
1921 ctactgacac tgcctcaact cccacaattc ctgtagccac caccatatct gtatcagtga
1981 tcacagaagg aagcacacct gggacaacca tttttattcc cagcactcct gtcaccagtt
2041 ctactgctga tgtctttcct gcaacaactg gtgctgtatc tacccctgtg ataacttcca
2101 ctgaactaaa cacaccatca acctccagta gtagtaccac cacatctttt tcaactacta
2161 aggaatttac aacacccgca atgactactg cagctcccct cacatatgtg accatgtcta
2221 ctgcccccag cacacccaga acaaccagca gaggctgcac tacttctgca tcaacgcttt
2281 ctgcaaccag tacacctcac acctctactt ctgtcaccac ccgtcctgtg accccttcat
2341 cagaatccag caggccgtca acaattactt ctcacaccat cccacctaca tttcctcctg
2401 ctcactccag tacacctcca acaacctctg cctcctccac gactgtgaac cctgaggctg
2461 tcaccaccat gaccaccagg acaaaaccca gcacacggac cacttccttc cccacggtga
2521 ccaccaccgc tgtccccacg aatactacaa ttaagagcaa ccccacctca actcctactg
2581 tgccaagaac cacaacatgc tttggagatg ggtgccagaa tacggcctct cgctgcaaga
2641 atggaggcac ctgggatggg ctcaagtgcc agtgtcccaa cctctattat ggggagttgt
2701 gtgaggaggt ggtcagcagc attgacatag ggccaccgga gactatctct gcccaaatgg
2761 aactgactgt gacagtgacc agtgtgaagt tcaccgaaga gctaaaaaac cactcttccc
2821 aggaattcca ggagttcaaa cagacattca cggaacagat gaatattgtg tattccggga
2881 tccctgagta tgtcggggtg aacatcacaa agctacgtct tggcagtgtg gtggtggagc
2941 atgacgtcct cctaagaacc aagtacacac cagaatacaa gacagtattg gacaatgcca
3001 ccgaagtagt gaaagagaaa atcacaaaag tgaccacaca gcaaataatg attaatgata
3061 tttgctcaga catgatgtgt ttcaacacca ctggcaccca agtgcaaaac attacggtga
3121 cccagtacga ccctgaagag gactgccgga agatggccaa ggaatatgga gactacttcg
3181 tagtggagta ccgggaccag aagccatact gcatcagccc ctgtgagcct ggcttcagtg
3241 tctccaagaa ctgtaacctc ggcaagtgcc agatgtctct aagtggacct cagtgcctct
3301 gcgtgaccac ggaaactcac tggtacagtg gggagacctg taaccagggc acccagaaga
3361 gtctggtgta cggcctcgtg ggggcagggg tcgtgctgat gctgatcatc ctggtagctc
3421 tcctgatgct cgttttccgc tccaagagag aggtgaaacg gcaaaagtac agattgtctc
3481 agttatacaa gtggcaagaa gaggacagtg gaccagctcc tgggaccttc caaaacattg
3541 gctttgacat ctgccaagat gatgattcca tccacctgga gtccatctat agtaatttcc
3601 agccctcctt gagacacata gaccctgaaa caaagatccg aattcagagg cctcaggtaa
3661 tgacgacatc attttaaggc atggagctga gaagtctggg agtgaggaga tcccagtccg
3721 gctaagcttg g
//