LOCUS BC126258 987 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens transmembrane inner ear, mRNA (cDNA clone MGC:161536
IMAGE:8991974), complete cds.
ACCESSION BC126258
VERSION BC126258.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 987)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 987)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: G Column: 12.
FEATURES Location/Qualifiers
source 1..987
/db_xref="H-InvDB:HIT000388850"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161536 IMAGE:8991974"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGGCCTCG"
gene 1..987
/gene="TMIE"
/db_xref="GeneID:259236"
/db_xref="HGNC:HGNC:30800"
/db_xref="MIM:607237"
CDS 119..586
/gene="TMIE"
/codon_start=1
/product="transmembrane inner ear"
/protein_id="AAI26259.1"
/db_xref="GeneID:259236"
/db_xref="HGNC:HGNC:30800"
/db_xref="MIM:607237"
/translation="MAGWPGAGPLCVLGGAALGVCLAGVAGQLVEPSTAPPKPKPPPL
TKETVVFWDMRLWHVVGIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMY
TDKLETVPPLNELTEVPGEDKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK"
BASE COUNT 203 a 285 c 327 g 172 t
ORIGIN
1 atgctcgctg actacccgtg gccaaagccc gtggccaccg agcgccggct ggcaggggca
61 gtgaccggcg gccggcccgt tcgtccctgg gctccgcaag cggcgcggtg gcacgaagat
121 ggcggggtgg ccgggcgcgg gtcccctctg cgtgctgggc ggcgccgcac tcggggtgtg
181 cctcgcgggg gttgccgggc agctggtgga gcccagcacg gccccaccca agcccaagcc
241 gcctccgctg accaaggaga cagtggtgtt ctgggacatg cgcctgtggc acgtggtggg
301 catcttttcg ctcttcgtgt tgtccatcat catcacgctg tgctgtgtct tcaactgtcg
361 tgtgccacgg acccggaagg agatcgaagc ccggtacctg cagcgaaagg cagccaagat
421 gtacacagac aagctggaga ctgtgccacc cctcaatgag ctcacagaag tcccaggaga
481 ggataagaag aagaagaaga agaagaagga cagtgtggac acagtggcca tcaaagtaga
541 ggaggatgag aagaatgagg ccaagaagaa gaaaggagag aaatgaagac atcctgggca
601 gcttgggctg gcgggccctg gagctcaagc cgtggccggg gtccaggcat gttggactct
661 gagctcattt ggggaccaca gaggctgtgg tcagagaggg aagctgaggc ccatggccac
721 atcctcatgg cccatcaggg gcaggaacca gacaatctcg taggtgtcct gccccccagc
781 ctaggcttgg ctcctttcac cccatccaca tgggtactgt ctcggcagag gtggtctggt
841 gccaccgtcc ctctgcagat acactgctct ccccacccag acctgcctgt ctcccaccct
901 ttctgccagg gatggcagtg gctgtgaagg agtaatggga tatggggtta cttcagccac
961 cctttctggc acgaaatggc tgaagtg
//