LOCUS       BC126248                 905 bp    mRNA    linear   HUM 23-OCT-2006
DEFINITION  Homo sapiens outer dense fiber of sperm tails 3, mRNA (cDNA clone
            MGC:161526 IMAGE:8991964), complete cds.
ACCESSION   BC126248
VERSION     BC126248.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 905)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 7 Row: G Column: 2.
FEATURES             Location/Qualifiers
     source          1..905
                     /db_xref="H-InvDB:HIT000388840"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:161526 IMAGE:8991964"
                     /tissue_type="Pooled, cerebellum, kidney, placenta,
                     testis, lung, colon, liver, heart, thyroid, bladder,
                     uterus, PCR rescued clones"
                     /clone_lib="NIH_MGC_361"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO; Clone identification sequence
                     tag: TCTGCGTC"
     gene            1..905
                     /gene="ODF3"
                     /gene_synonym="hSHIPPO"
                     /gene_synonym="SHIPPO1"
                     /gene_synonym="TISP50"
                     /db_xref="GeneID:113746"
                     /db_xref="HGNC:HGNC:19905"
                     /db_xref="MIM:608356"
     CDS             103..867
                     /gene="ODF3"
                     /gene_synonym="hSHIPPO"
                     /gene_synonym="SHIPPO1"
                     /gene_synonym="TISP50"
                     /codon_start=1
                     /product="outer dense fiber of sperm tails 3"
                     /protein_id="AAI26249.1"
                     /db_xref="GeneID:113746"
                     /db_xref="HGNC:HGNC:19905"
                     /db_xref="MIM:608356"
                     /translation="MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPT
                     KLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPG
                     PGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPS
                     FSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGP
                     GAHSPEKVTLTKPCAPVVTFGIKHSDYMTPLLVDVE"
BASE COUNT          207 a          328 c          221 g          149 t
ORIGIN      
        1 cccctcagct cagcctcaat caagaagttc cccatctttg accactccaa gtaggagaaa
       61 ccggcccagg gctcccttag agccgagaac agtgagctgg ccatgacgga ggaggtatgg
      121 atgggtacct ggagacccca tcgcccccgg ggacccatca tggccctcta cagcagccct
      181 ggacccaagt acctgattcc accaacaaca ggcttcatga agcacacgcc caccaagctg
      241 cgtgcaccgg cctacagctt ccgtggggcc cccatgctcc tggcagagaa ctgctcccca
      301 gggccccgtt acaatgtaaa ccccaagata ctgaggactg gcaaggacct tggccctgcc
      361 tactccatcc tggggcgcta ccaaaccaag accatgctga ctcctggtcc aggtgactac
      421 tttccagaga aatccaccaa gtacgtgttc gactcagcac ccagccactc catctctgcc
      481 cggacaaagg cattccgagt ggacagcacc ccaggccccg ctgcgtacat gctgcccatg
      541 gtaatggggc ccaataccgt cggcaaggcc tcccagccct ccttttccat caagggccgc
      601 agcaagctgg gcggcttcag cgacgaccta cacaagaccc caggtcccgc agcctaccgc
      661 caaactgatg tgcgggtgac caagttcaag gctccgcagt acaccatggc tgcccgtgtg
      721 gagcccccag gggacaagac cctcaagcca ggaccaggcg cccacagccc tgagaaggtg
      781 accctgacca agccctgcgc cccagttgtc accttcggca tcaaacactc tgattacatg
      841 actcccctgc tggttgatgt ggaataacgc cagccctgct gtgccccatc acacccggca
      901 tctac
//