LOCUS BC126248 905 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens outer dense fiber of sperm tails 3, mRNA (cDNA clone MGC:161526 IMAGE:8991964), complete cds. ACCESSION BC126248 VERSION BC126248.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 905) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 905) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: G Column: 2. FEATURES Location/Qualifiers source 1..905 /db_xref="H-InvDB:HIT000388840" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161526 IMAGE:8991964" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_361" /lab_host="DH10B" /note="Vector: pCR4-TOPO; Clone identification sequence tag: TCTGCGTC" gene 1..905 /gene="ODF3" /gene_synonym="hSHIPPO" /gene_synonym="SHIPPO1" /gene_synonym="TISP50" /db_xref="GeneID:113746" /db_xref="HGNC:HGNC:19905" /db_xref="MIM:608356" CDS 103..867 /gene="ODF3" /gene_synonym="hSHIPPO" /gene_synonym="SHIPPO1" /gene_synonym="TISP50" /codon_start=1 /product="outer dense fiber of sperm tails 3" /protein_id="AAI26249.1" /db_xref="GeneID:113746" /db_xref="HGNC:HGNC:19905" /db_xref="MIM:608356" /translation="MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPT KLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPG PGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPS FSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGP GAHSPEKVTLTKPCAPVVTFGIKHSDYMTPLLVDVE" BASE COUNT 207 a 328 c 221 g 149 t ORIGIN 1 cccctcagct cagcctcaat caagaagttc cccatctttg accactccaa gtaggagaaa 61 ccggcccagg gctcccttag agccgagaac agtgagctgg ccatgacgga ggaggtatgg 121 atgggtacct ggagacccca tcgcccccgg ggacccatca tggccctcta cagcagccct 181 ggacccaagt acctgattcc accaacaaca ggcttcatga agcacacgcc caccaagctg 241 cgtgcaccgg cctacagctt ccgtggggcc cccatgctcc tggcagagaa ctgctcccca 301 gggccccgtt acaatgtaaa ccccaagata ctgaggactg gcaaggacct tggccctgcc 361 tactccatcc tggggcgcta ccaaaccaag accatgctga ctcctggtcc aggtgactac 421 tttccagaga aatccaccaa gtacgtgttc gactcagcac ccagccactc catctctgcc 481 cggacaaagg cattccgagt ggacagcacc ccaggccccg ctgcgtacat gctgcccatg 541 gtaatggggc ccaataccgt cggcaaggcc tcccagccct ccttttccat caagggccgc 601 agcaagctgg gcggcttcag cgacgaccta cacaagaccc caggtcccgc agcctaccgc 661 caaactgatg tgcgggtgac caagttcaag gctccgcagt acaccatggc tgcccgtgtg 721 gagcccccag gggacaagac cctcaagcca ggaccaggcg cccacagccc tgagaaggtg 781 accctgacca agccctgcgc cccagttgtc accttcggca tcaaacactc tgattacatg 841 actcccctgc tggttgatgt ggaataacgc cagccctgct gtgccccatc acacccggca 901 tctac //