LOCUS BC126231 4351 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51), mRNA (cDNA clone MGC:161509 IMAGE:8991947), complete cds. ACCESSION BC126231 VERSION BC126231.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4351) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4351) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: F Column: 9. FEATURES Location/Qualifiers source 1..4351 /db_xref="H-InvDB:HIT000388823" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161509 IMAGE:8991947" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_364" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: TAAATGGT" gene 1..4351 /gene="ITGAV" /gene_synonym="CD51" /db_xref="GeneID:3685" /db_xref="HGNC:HGNC:6150" /db_xref="MIM:193210" CDS 130..3276 /gene="ITGAV" /gene_synonym="CD51" /codon_start=1 /product="integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)" /protein_id="AAI26232.1" /db_xref="GeneID:3685" /db_xref="HGNC:HGNC:6150" /db_xref="MIM:193210" /translation="MAFPPRRRLRLGPRGLPLLLSGLLLPLCRAFNLDVDSPAEYSGP EGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEF DATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFL QDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQV AEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRA ARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRG SDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAA PYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYP DLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFC LKADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCE ELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILL DCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQAD FIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTS VKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENPET EEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDM EINPLRIKISSLQTTEKNDTVAGQGERDHLITKRDLALSEGDIHTLGCGVAQCLKIVC QVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDIT NSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEE QEREQLQPHENGEGNSET" BASE COUNT 1218 a 859 c 965 g 1309 t ORIGIN 1 ctagccgaga agagagcggc cggcaagttt gggcgcgcgc aggcggcggg ccgcgggcac 61 tgggcgcctc gctggggcgg ggggaggtgg ctaccgctcc cggcttggcg tcccgcgcgc 121 acttcggcga tggcttttcc gccgcggcga cggctgcgcc tcggtccccg cggcctcccg 181 cttcttctct cgggactcct gctacctctg tgccgcgcct tcaacctaga cgtggacagt 241 cctgccgagt actctggccc cgagggaagt tacttcggct tcgccgtgga tttcttcgtg 301 cccagcgcgt cttcccggat gtttcttctc gtgggagctc ccaaagcaaa caccacccag 361 cctgggattg tggaaggagg gcaggtcctc aaatgtgact ggtcttctac ccgccggtgc 421 cagccaattg aatttgatgc aacaggcaat agagattatg ccaaggatga tccattggaa 481 tttaagtccc atcagtggtt tggagcatct gtgaggtcga aacaggataa aattttggcc 541 tgtgccccat tgtaccattg gagaactgag atgaaacagg agcgagagcc tgttggaaca 601 tgctttcttc aagatggaac aaagactgtt gagtatgctc catgtagatc acaagatatt 661 gatgctgatg gacagggatt ttgtcaagga ggattcagca ttgattttac taaagctgac 721 agagtacttc ttggtggtcc tggtagcttt tattggcaag gtcagcttat ttcggatcaa 781 gtggcagaaa tcgtatctaa atacgacccc aatgtttaca gcatcaagta taataaccaa 841 ttagcaactc ggactgcaca agctattttt gatgacagct atttgggtta ttctgtggct 901 gtcggagatt tcaatggtga tggcatagat gactttgttt caggagttcc aagagcagca 961 aggactttgg gaatggttta tatttatgat gggaagaaca tgtcctcctt atacaatttt 1021 actggcgagc agatggctgc atatttcgga ttttctgtag ctgccactga cattaatgga 1081 gatgattatg cagatgtgtt tattggagca cctctcttca tggatcgtgg ctctgatggc 1141 aaactccaag aggtggggca ggtctcagtg tctctacaga gagcttcagg agacttccag 1201 acgacaaagc tgaatggatt tgaggtcttt gcacggtttg gcagtgccat agctcctttg 1261 ggagatctgg accaggatgg tttcaatgat attgcaattg ctgctccata tgggggtgaa 1321 gataaaaaag gaattgttta tatcttcaat ggaagatcaa caggcttgaa cgcagtccca 1381 tctcaaatcc ttgaagggca gtgggctgct cgaagcatgc caccaagctt tggctattca 1441 atgaaaggag ccacagatat agacaaaaat ggatatccag acttaattgt aggagctttt 1501 ggtgtagatc gagctatctt atacagggcc agaccagtta tcactgtaaa tgctggtctt 1561 gaagtgtacc ctagcatttt aaatcaagac aataaaacct gctcactgcc tggaacagct 1621 ctcaaagttt cctgttttaa tgttaggttc tgcttaaagg cagatggcaa aggagtactt 1681 cccaggaaac ttaatttcca ggtggaactt cttttggata aactcaagca aaagggagca 1741 attcgacgag cactgtttct ctacagcagg tccccaagtc actccaagaa catgactatt 1801 tcaagggggg gactgatgca gtgtgaggaa ttgatagcgt atctgcggga tgaatctgaa 1861 tttagagaca aactcactcc aattactatt tttatggaat atcggttgga ttatagaaca 1921 gctgctgata caacaggctt gcaacccatt cttaaccagt tcacgcctgc taacattagt 1981 cgacaggctc acattctact tgactgtggt gaagacaatg tctgtaaacc caagctggaa 2041 gtttctgtag atagtgatca aaagaagatc tatattgggg atgacaaccc tctgacattg 2101 attgttaagg ctcagaatca aggagaaggt gcctacgaag ctgagctcat cgtttccatt 2161 ccactgcagg ctgatttcat cggggttgtc cgaaacaatg aagccttagc aagactttcc 2221 tgtgcattta agacagaaaa ccaaactcgc caggtggtat gtgaccttgg aaacccaatg 2281 aaggctggaa ctcaactctt agctggtctt cgtttcagtg tgcaccagca gtcagagatg 2341 gatacttctg tgaaatttga cttacaaatc caaagctcaa atctatttga caaagtaagc 2401 ccagttgtat ctcacaaagt tgatcttgct gttttagctg cagttgagat aagaggagtc 2461 tcgagtcctg atcatatctt tcttccgatt ccaaactggg agcacaagga gaaccctgag 2521 actgaagaag atgttgggcc agttgttcag cacatctatg agctgagaaa caatggtcca 2581 agttcattca gcaaggcaat gctccatctt cagtggcctt acaaatataa taataacact 2641 ctgttgtata tccttcatta tgatattgat ggaccaatga actgcacttc agatatggag 2701 atcaaccctt tgagaattaa gatctcatct ttgcaaacaa ctgaaaagaa tgacacggtt 2761 gccgggcaag gtgagcggga ccatctcatc actaagcggg atcttgccct cagtgaagga 2821 gatattcaca ctttgggttg tggagttgct cagtgcttga agattgtctg ccaagttggg 2881 agattagaca gaggaaagag tgcaatcttg tacgtaaagt cattactgtg gactgagact 2941 tttatgaata aagaaaatca gaatcattcc tattctctga agtcgtctgc ttcatttaat 3001 gtcatagagt ttccttataa gaatcttcca attgaggata tcaccaactc cacattggtt 3061 accactaatg tcacctgggg cattcagcca gcgcccatgc ctgtgcctgt gtgggtgatc 3121 attttagcag ttctagcagg attgttgcta ctggctgttt tggtatttgt aatgtacagg 3181 atgggctttt ttaaacgggt ccggccacct caagaagaac aagaaaggga gcagcttcaa 3241 cctcatgaaa atggtgaagg aaactcagaa acttaactgc agtttttaag ttatgctaca 3301 tcttgaccca ctagaattag caactttatt atagatttaa actttcttca tgaggagtaa 3361 aaatccaagg ctttactgct gatagtgcta attggcatta accacaaaat gagaattata 3421 tttgtcaacc ttctccttat aaataagttc agacatacat ttaataacat agggtgactt 3481 gtgtttttag gtatttaaat aataaaattt caagggatag tttttattca atgtatataa 3541 gacaggtagt gcctgattta ctactttata taaaatagta cctccttcag ttactgtttc 3601 tgatttaatg tacggaactt tatttgttgt tgttgttgtt gttgttgttg ttgttttaaa 3661 gcagtccaaa tttggacctt agcaatcatg tcttttgtat aggtacttaa tgttaataca 3721 tattacacta cagtttactt ttcagaatac taaagacttt ataactgcat gaacttggat 3781 ttttttaatc actcatatgg tagaatttta taaacacata catgatacca tccaaattct 3841 tgcttttaat aacaaaggta caatattttg ttttagtatg aaaatctggt agatcctatt 3901 acacttctgt ttatattaaa tccacaatat tttattacat ttttaacttg tataaatttt 3961 aggtcaaatc cttcaagcca acctatacta aaaattagtt ccataatcac aaatggctct 4021 tttgtgtaat tgtttaattt cacctgaata tcataatgct taaagccata tggagttgga 4081 aattatttcc aaagcatatt tattccattg ttttagtctg gctatttaca gtataaaaaa 4141 agcattttta ttaaaatact gtgtagttct ttgagatagt tgcttatgca tatagtatta 4201 cattcttaga gtagagcaga gtttttagtt agtattaatt tattttcctc cattcatgta 4261 cttttcctta tatttccaaa actgttactg agaatgggtc aagatcagtg agaaatcttt 4321 acagttgaca ggaacctgga ccccttaccc c //