LOCUS BC126227 5206 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens DNA (cytosine-5-)-methyltransferase 1, mRNA (cDNA clone MGC:161505 IMAGE:8991943), complete cds. ACCESSION BC126227 VERSION BC126227.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5206) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5206) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: F Column: 5. FEATURES Location/Qualifiers source 1..5206 /db_xref="H-InvDB:HIT000388819" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161505 IMAGE:8991943" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_363" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO; Clone identification sequence tag: TGTTTCTT" gene 1..5206 /gene="DNMT1" /gene_synonym="CXXC9" /gene_synonym="MCMT" /db_xref="GeneID:1786" /db_xref="HGNC:HGNC:2976" /db_xref="MIM:126375" CDS 181..5079 /gene="DNMT1" /gene_synonym="CXXC9" /gene_synonym="MCMT" /codon_start=1 /product="DNMT1 protein" /protein_id="AAI26228.1" /db_xref="GeneID:1786" /db_xref="HGNC:HGNC:2976" /db_xref="MIM:126375" /translation="MPARTAPARVPTLAVPAISLPDDVRRRLKDLERDSLTEKECVKE KLNLLHEFLQTEIKNQLCDLETKLRKEELSEEGYLAKVKSLLNKDLSLENGAHAYNRE VNGRLENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKRSRDPPASASQV TGIRAEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDE KRRRVTSRERVARPLPAEEPERAKSGTRTEKEEERDEKEEKRLRSQTKEPTPKQKLKE EPDREARAGVQADEDEDGDEKDEKKHRSQPKDLAAKRRPEEKEPEKVNPQISDEKDED EKEEKRRKTTPKEPTEKKMARAKTVMNSKTHPPKCIQCGQYLDDPDLKYGQHPPDAVD EPQMLTNEKLSIFDANESGFESYEALPQHKLTCFSVYCKHGHLCPIDTGLIEKNIELF FSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFDGGEKALIGFSTSFAEYILMDPS PEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSL LRHAQFVVEQVESYDEAGDSDEQPIFLTPCMRDLIKLAGVTLGQRRAQARRQTIRHST REKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGK CKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQGKKK KQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTAL WEDSSNGQMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPS ENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCAR LAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPV KRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDI KIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECV QVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEP EIEIKLPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFT EDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS LVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY GVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPF RTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSAL VAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSC VEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQ GRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL CMLAKARESASAKIKEEEAAKD" BASE COUNT 1345 a 1461 c 1466 g 934 t ORIGIN 1 ggctccgttc catccttctg cacagggtat cgcctctctc cgtttggtac atcccctcct 61 cccccacgcc cggactgggg tggtagacgc cgcctccgct catcgcccct ccccatcggt 121 ttccgcgcga aaagccgggg cgcctgcgct gccgccgccg cgtctgctga agcctccgag 181 atgccggcgc gtaccgcccc agcccgggtg cccacactgg ccgtcccggc catctcgctg 241 cccgacgatg tccgcaggcg gctcaaagat ttggaaagag acagcttaac agaaaaggaa 301 tgtgtgaagg agaaattgaa tctcttgcac gaatttctgc aaacagaaat aaagaatcag 361 ttatgtgact tggaaaccaa attacgtaaa gaagaattat ccgaggaggg ctacctggct 421 aaagtcaaat cccttttaaa taaagatttg tccttggaga acggtgctca tgcttacaac 481 cgggaagtga atggacgtct agaaaacggg aaccaagcaa gaagtgaagc ccgtagagtg 541 ggaatggcag atgccaacag cccccccaaa cccctttcca aacctcgcac gcccaggagg 601 agcaagtccg atggagaggc taagcgttca agagaccctc ctgcctcagc ctcccaagta 661 actgggatta gagctgaacc ttcacctagc cccaggatta caaggaaaag caccaggcaa 721 accaccatca catctcattt tgcaaagggc cctgccaaac ggaaacctca ggaagagtct 781 gaaagagcca aatcggatga gtccatcaag gaagaagaca aagaccagga tgagaagaga 841 cgtagagtta catccagaga acgagttgct agaccgcttc ctgcagaaga acctgaaaga 901 gcaaaatcag gaacgcgcac tgaaaaggaa gaagaaagag atgaaaaaga agaaaagaga 961 ctccgaagtc aaaccaaaga accaacaccc aaacagaaac tgaaggagga gccggacaga 1021 gaagccaggg caggcgtgca ggctgacgag gacgaagatg gagacgagaa agatgagaag 1081 aagcacagaa gtcaacccaa agatctagct gccaaacgga ggcccgaaga aaaagaacct 1141 gaaaaagtaa atccacagat ttctgatgaa aaagacgagg atgaaaagga ggagaagaga 1201 cgcaaaacga cccccaaaga accaacggag aaaaaaatgg ctcgcgccaa aacagtcatg 1261 aactccaaga cccaccctcc caagtgcatt cagtgcgggc agtacctgga cgaccctgac 1321 ctcaaatatg ggcagcaccc accagacgcg gtggatgagc cacagatgct gacaaatgag 1381 aagctgtcca tctttgatgc caacgagtct ggctttgaga gttatgaggc gcttccccag 1441 cacaaactga cctgcttcag tgtgtactgt aagcacggtc acctgtgtcc catcgacacc 1501 ggcctcatcg agaagaatat cgaactcttc ttttctggtt cagcaaaacc aatctatgat 1561 gatgacccgt ctcttgaagg tggtgttaat ggcaaaaatc ttggccccat aaatgaatgg 1621 tggatcactg gctttgatgg aggtgaaaag gccctcatcg gcttcagcac ctcatttgcc 1681 gaatacattc tgatggatcc cagtcccgag tatgcgccca tatttgggct gatgcaggag 1741 aagatctaca tcagcaagat tgtggtggag ttcctgcaga gcaattccga ctcgacctat 1801 gaggacctga tcaacaagat cgagaccacg gttcctcctt ctggcctcaa cttgaaccgc 1861 ttcacagagg actccctcct gcgacacgcg cagtttgtgg tggagcaggt ggagagttat 1921 gacgaggccg gggacagtga tgagcagccc atcttcctga cgccctgcat gcgggacctg 1981 atcaagctgg ctggggtcac gctgggacag aggcgagccc aggcgaggcg gcagaccatc 2041 aggcattcta ccagggagaa ggacagggga cccacgaaag ccaccaccac caagctggtc 2101 taccagatct tcgatacttt cttcgcagag caaattgaaa aggatgacag agaagacaag 2161 gagaacgcct ttaagcgccg gcgatgtggc gtctgtgagg tgtgtcagca gcctgagtgt 2221 gggaaatgta aagcctgcaa ggacatggtt aaatttggtg gcagtggacg gagcaagcag 2281 gcttgccaag agcggaggtg tcccaatatg gccatgaagg aggcagatga cgatgaggaa 2341 gtcgatgata acatcccaga gatgccgtca cccaaaaaaa tgcaccaggg gaagaagaag 2401 aaacagaaca agaatcgcat ctcttgggtc ggagaagccg tcaagactga tgggaagaag 2461 agttactata agaaggtgtg cattgatgcg gaaaccctgg aagtggggga ctgtgtctct 2521 gttattccag atgattcctc aaaaccgctg tatctagcaa gggtcacggc gctgtgggag 2581 gacagcagca acgggcagat gtttcacgcc cactggttct gcgctgggac agacacagtc 2641 ctcggggcca cgtcggaccc tctggagctg ttcttggtgg atgaatgtga ggacatgcag 2701 ctttcatata tccacagcaa agtgaaagtc atctacaaag ccccctccga aaactgggcc 2761 atggagggag gcatggatcc cgagtccctg ctggaggggg acgacgggaa gacctacttc 2821 taccagctgt ggtatgatca agactacgcg agattcgagt cccctccaaa aacccagcca 2881 acagaggaca acaagttcaa attctgtgtg agctgtgccc gtctggctga gatgaggcaa 2941 aaagaaatcc ccagggtcct ggagcagctc gaggacctgg atagccgggt cctctactac 3001 tcagccacca agaacggcat cctgtaccga gttggtgatg gtgtgtacct gccccctgag 3061 gccttcacgt tcaacatcaa gctgtccagt cccgtgaaac gcccacggaa ggagcccgtg 3121 gatgaggacc tgtacccaga gcactaccgg aaatactccg actacatcaa aggcagcaac 3181 ctggatgccc ctgagcccta ccgaattggc cggatcaaag agatcttctg tcccaagaag 3241 agcaacggca ggcccaatga gactgacatc aaaatccggg tcaacaagtt ctacaggcct 3301 gagaacaccc acaagtccac tccagcgagc taccacgcag acatcaacct gctctactgg 3361 agcgacgagg aggccgtggt ggacttcaag gctgtgcagg gccgctgcac cgtggagtat 3421 ggggaggacc tgcccgagtg cgtccaggtg tactccatgg gcggccccaa ccgcttctac 3481 ttcctcgagg cctataatgc aaagagcaaa agctttgaag atcctcccaa ccatgcccgt 3541 agccctggaa acaaagggaa gggcaaggga aaagggaagg gcaagcccaa gtcccaagcc 3601 tgtgagccga gcgagccaga gatagagatc aagctgccca agctgcggac cctggatgtg 3661 ttttctggct gcggggggtt gtcggaggga ttccaccaag caggcatctc tgacacgctg 3721 tgggccatcg agatgtggga ccctgcggcc caggcgttcc ggctgaacaa ccccggctcc 3781 acagtgttca cagaggactg caacatcctg ctgaagctgg tcatggctgg ggagaccacc 3841 aactcccgcg gccagcggct gccccagaag ggagacgtgg agatgctgtg cggcgggccg 3901 ccctgccagg gcttcagcgg catgaaccgc ttcaattcgc gcacctactc caagttcaaa 3961 aactctctgg tggtttcctt cctcagctac tgcgactact accggccccg gttcttcctc 4021 ctggagaatg tcaggaactt tgtctccttc aagcgctcca tggtcctgaa gctcaccctc 4081 cgctgcctgg tccgcatggg ctatcagtgc accttcggcg tgctgcaggc cggtcagtac 4141 ggcgtggccc agactaggag gcgggccatc atcctggccg cggcccctgg agagaagctc 4201 cctctgttcc cggagccact gcacgtgttt gctccccggg cctgccagct gagcgtggtg 4261 gtggatgaca agaagtttgt gagcaacata accaggttga gctcgggtcc tttccggacc 4321 atcacggtgc gagacacgat gtccgacctg ccggaggtgc ggaatggagc ctcggcactg 4381 gagatctcct acaacgggga gcctcagtcc tggttccaga ggcagctccg gggcgcacag 4441 taccagccca tcctcaggga ccacatctgt aaggacatga gtgcattggt ggctgcccgc 4501 atgcggcaca tccccttggc cccagggtca gactggcgcg atctgcccaa catcgaggtg 4561 cggctctcag acggcaccat ggccaggaag ctgcggtata cccaccatga caggaagaac 4621 ggccgcagca gctctggggc cctccgtggg gtctgctcct gcgtggaagc cggcaaagcc 4681 tgcgaccccg cagccaggca gttcaacacc ctcatcccct ggtgcctgcc ccacaccggg 4741 aaccggcaca accactgggc tggcctctat ggaaggctcg agtgggacgg cttcttcagc 4801 acaaccgtca ccaaccccga gcccatgggc aagcagggcc gcgtgctcca cccagagcag 4861 caccgtgtgg tgagcgtgcg ggagtgtgcc cgctcccagg gcttccctga cacctaccgg 4921 ctcttcggca acatcctgga caagcaccgg caggtgggca atgccgtgcc accgcccctg 4981 gccaaagcca ttggcttgga gatcaagctt tgtatgttgg ccaaagcccg agagagtgcc 5041 tcagctaaaa taaaggagga ggaagctgct aaggactagt tctgccctcc cgtcacccct 5101 gtttctggca ccaggaatcc ccaacatgca ctgatgttgt gtttttaaca tgtcaatctg 5161 tccgttcaca tgtgtggtac atggtgtttg tggccttggc tgacat //