LOCUS BC126203 5147 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens protein tyrosine phosphatase, receptor type, O, mRNA (cDNA clone MGC:161481 IMAGE:8991919), complete cds. ACCESSION BC126203 VERSION BC126203.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5147) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5147) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: E Column: 5. FEATURES Location/Qualifiers source 1..5147 /db_xref="H-InvDB:HIT000388795" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161481 IMAGE:8991919" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_313" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: CAGCCCGG" gene 1..5147 /gene="PTPRO" /gene_synonym="GLEPP1" /gene_synonym="PTP-U2" /gene_synonym="PTPU2" /db_xref="GeneID:5800" /db_xref="HGNC:HGNC:9678" /db_xref="MIM:600579" CDS 171..3821 /gene="PTPRO" /gene_synonym="GLEPP1" /gene_synonym="PTP-U2" /gene_synonym="PTPU2" /codon_start=1 /product="protein tyrosine phosphatase, receptor type, O" /protein_id="AAI26204.1" /db_xref="GeneID:5800" /db_xref="HGNC:HGNC:9678" /db_xref="MIM:600579" /translation="MGHLPTGIHGARRLLPLLWLFVLFKNATAFHVTVQDDNNIVVSL EASDVISPASVYVVKITGESKNYFFEFEEFNSTLPPPVIFKASYHGLYYIITLVVVNG NVVTKPSRSITVLTKPLPVTSVSIYDYKPSPETGVLFEIHYPEKYNVFTRVNISYWEG KDFRTMLYKDFFKGKTVFNHWLPGMCYSNITFQLVSEATFNKSTLVEYSGVSHEPKQH RTAPYPPQNISVRIVNLNKNNWEEQSGNFPEESFMRSQDTIGKEKLFHFTEETPEIPS GNISSGWPDFNSSDYETTSQPYWWDSASAAPESEDEFVSVLPMEYENNSTLSETEKST SGSFSFFPVQMILTWLPPKPPTAFDGFHIHIEREENFTEYLMVDEEAHEFVAELKEPG KYKLSVTTFSSSGSCETRKSQSAKSLSFYISPSGEWIEELTEKPQHVSVHVLSSTTAL MSWTSSQENYNSTIVSVVSLTCQKQKESQRLEKQYCTQVNSSKPIIENLVPGAQYQVV IYLRKGPLIGPPSDPVTFAIVPTGIKDLMLYPLGPTAVVLSWTRPYLGVFRKYVVEMF YFNPATMTSEWTTYYEIAATVSLTASVRIANLLPAWYYNFRVTMVTWGDPELSCCDSS TISFITAPVAPEITSVEYFNSLLYISWTYGDDTTDLSHSRMLHWMVVAEGKKKIKKSV TRNVMTAILSLPPGDIYNLSVTACTERGSNTSMLRLVKLEPAPPKSLFAVNKTQTSVT LLWVEEGVADFFEVFCQQVGSSQKTKLQEPVAVSSHVVTISSLLPATAYNCSVTSFSH DSPSVPTFIAVSTMVTEMNPNVVVISVLAILSTLLIGLLLVTLIILRKKHLQMARECG AGTFVNFASLERDGKLPYNWRRSIFAFLTLLPSCLWTDYLLAFYINPWSKNGLKKRKL TNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNIL PYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKS QIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADE MQDVMHFNYTAWPDHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTF IALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCVQLMWMKKKQQFC ISDVIYENVSKS" BASE COUNT 1440 a 1115 c 1141 g 1451 t ORIGIN 1 gcagaggagg aaagggagca ggcgcagggg gactggaaag gcagcatgcg ctcgccagga 61 gcaacctcgg cgcccagggt ctgaggctgc agccccagtt cgccattgtg agccgccgcc 121 gggggagtcc gctagcgcag ccgtgccccc gagtccccgt ccgcgcagcg atggggcacc 181 tgcccacggg gatacacggc gcccgccgcc tcctgcctct gctctggctc tttgtgctgt 241 tcaagaatgc tacagctttc catgtaactg tccaagatga taataacatc gttgtctcat 301 tagaagcttc agacgtcatc agtccagcat ctgtgtatgt tgtgaagata actggtgaat 361 ccaaaaatta tttcttcgaa tttgaggaat tcaacagcac tttgcctcct cctgttattt 421 tcaaggccag ttatcatggc ctttattata taatcactct ggtagtggta aatggaaatg 481 tggtgaccaa gccatccaga tcaatcactg tgttaacaaa acctctacct gtaaccagtg 541 tttccatata tgactataaa ccttctcctg aaacaggagt cctgtttgaa atacattatc 601 cagaaaaata taacgttttc acaagagtga acattagcta ctgggaaggt aaagacttcc 661 ggacaatgct atataaagat ttctttaagg gaaaaacagt atttaatcac tggctgccag 721 gaatgtgtta tagtaatatc acctttcagc tggtatctga ggcaactttt aataaaagta 781 cccttgttga gtacagtggt gtcagtcacg aacccaaaca gcacagaact gccccttatc 841 cacctcaaaa tatttccgtt cgtatcgtaa acttgaacaa aaacaactgg gaagaacaga 901 gtggcaattt cccagaagaa tccttcatga gatcacaaga tacaatagga aaagaaaaac 961 tcttccattt tacagaagaa acccctgaaa ttccctcggg caacatttct tccggttggc 1021 ctgattttaa tagcagtgac tatgaaacta cgtctcagcc atattggtgg gacagtgcat 1081 ctgcagctcc tgaaagtgaa gatgaatttg tcagcgtact tcccatggaa tacgaaaata 1141 acagtacact cagtgagaca gagaagtcaa catcaggctc tttctccttt ttccctgtgc 1201 aaatgatatt gacctggtta ccacccaaac cacccactgc ttttgatggg ttccatatcc 1261 atattgaacg agaagagaac tttactgaat atttgatggt ggatgaagaa gcacatgaat 1321 ttgttgcaga actgaaggaa cctgggaaat ataagttatc tgtgacaacc tttagttcct 1381 caggatcttg tgaaactcga aaaagtcagt cagcaaaatc actcagcttt tatatcagtc 1441 cttcaggaga gtggattgaa gaactgaccg agaagccgca gcacgtgagt gtccacgttt 1501 taagctcaac cactgccttg atgtcctgga catcttccca agagaactac aacagcacca 1561 ttgtgtctgt ggtgtcgctg acctgccaga aacaaaagga gagccagagg cttgaaaagc 1621 agtactgcac tcaggtgaac tcaagcaaac ctattattga aaatctggtt cctggtgccc 1681 agtaccaggt tgtaatatac ctaaggaaag gccctttgat tggaccacct tcagatcctg 1741 tgacatttgc tattgttccc acaggaataa aggatttaat gctctatcct ttgggtccta 1801 cggccgtggt tctgagctgg accagacctt atttaggcgt gttcagaaaa tacgtggttg 1861 aaatgtttta tttcaaccct gctacaatga catcagagtg gaccacctac tatgaaatag 1921 cagcaactgt ttccttaact gcatccgtga gaatagctaa tctgctgcca gcatggtact 1981 acaacttccg ggttaccatg gtgacgtggg gagatccaga attgagctgc tgtgacagct 2041 ctaccatcag cttcataaca gccccagtgg ctccggaaat cacttctgtg gaatatttca 2101 acagtctgtt atatatcagt tggacatatg gggatgatac aacggacttg tcccattcta 2161 gaatgcttca ctggatggtg gttgcagaag gaaaaaagaa aattaaaaag agtgtaacac 2221 gcaatgtcat gactgcaatt ctcagcttgc ctccaggcga catctataac ctctcagtaa 2281 ctgcttgtac tgaaagagga agtaatacct ccatgctccg ccttgtcaag ctagaaccag 2341 ctccacccaa atcactcttc gcagtgaaca aaacccagac ttcagtgact ttgctgtggg 2401 tggaagaggg agtagctgat ttctttgaag ttttctgtca acaagttggc tccagtcaga 2461 aaaccaaact tcaggaacca gttgctgttt cttcccatgt cgtgaccatc tccagccttc 2521 ttcctgccac tgcctacaat tgtagtgtca ccagctttag ccatgacagc cccagtgtcc 2581 ctacgttcat agccgtctca acaatggtta cagagatgaa tcccaatgtg gtagtgatct 2641 ccgtgctggc catccttagc acacttttaa ttggactgtt gcttgttacc ctcattattc 2701 ttaggaaaaa gcatctgcag atggctaggg agtgtggagc tggtacattt gtcaattttg 2761 catccttaga gagggatgga aagcttccat acaactggcg taggagtata tttgctttct 2821 taaccctgct accctcatgt ctttggactg attatctttt ggcattttat attaatcctt 2881 ggagtaaaaa tggtttaaag aagaggaaac tgacaaaccc ggttcaactg gatgactttg 2941 atgcctatat taaggatatg gccaaagact ctgactataa attttctctt cagtttgagg 3001 agttgaaatt gattggactg gatatcccac actttgctgc agatcttcca ctgaatcgat 3061 gtaaaaaccg ttacacaaac atcctaccat atgacttcag ccgtgtgaga ttagtctcca 3121 tgaatgaaga ggaaggtgca gactacatca atgccaacta tattcctgga tacaactcac 3181 cccaggagta tattgccacc caggggccac tgcctgaaac cagaaatgac ttctggaaga 3241 tggtcctgca acaaaagtct cagattattg tcatgctcac tcagtgtaat gagaaaagga 3301 gggtgaaatg tgaccattac tggccattca cggaagaacc tatagcctat ggagacatca 3361 ctgtggagat gatttcagag gaagagcagg acgactgggc ctgtagacac ttccggatca 3421 actatgctga cgagatgcag gatgtgatgc attttaacta cactgcatgg cctgatcatg 3481 gtgtgcccac agcaaatgct gcagaaagta tcctgcagtt tgtacacatg gtccgacagc 3541 aagctaccaa gagcaaaggt cccatgatca ttcactgcag tgctggcgtg ggacggacag 3601 gaacattcat tgccctggac aggctcttgc agcacattcg ggatcatgag tttgttgaca 3661 tcttagggct ggtgtcagaa atgaggtcat accggatgtc tatggtacag acagaggagc 3721 agtacatttt tatccatcag tgtgtgcaac tgatgtggat gaagaagaag cagcagttct 3781 gcatcagtga tgtcatatac gagaatgtta gcaagtccta gttcagaatc cggagcagag 3841 aggacatgat gtgcgcccat cctcccttgc ttccagattg ttttagtggg ccctgatggt 3901 catttttcta aacagaggcc ctgctttgta atatgtggcc aaggagataa tttatctcac 3961 agaagcaccg ggaagactta gccttaaaga gcctacagtg tccttttgga ctctttcact 4021 tcgggacatt taataatgga ccaaattcaa cagaacacca ggaaggtcaa gacgctctcc 4081 aaagggcagg aagtacagca cttccgaaga gtttagttgg ccctttgctg gttgggctga 4141 gttttttatt tttaagtgtt tgtttttcag tgcaataatt tttgtgtgtg tgtgattctt 4201 atcagaaagt tgaattgttt tctgcctaca ccgttcatca gccccataac ccaggaagga 4261 acaggcattg ttagcatcag attatacctc attattaaaa ggaggcatgg ccacacatga 4321 agaaatggtc attctacttc aaagaaattg agccagcact atctgtactc caacattacc 4381 ggatctggat tggggaggtt ggtcagggaa gagaggggtt ctacccacag atcaactgtg 4441 taatctttta ctattcaagc tataattcag cttcaaagta gagtagaaaa aaaattgtct 4501 taactgttct agttcttgat ggttttcttc cttattaaca gttggtgttt cttccttggc 4561 ccttttggac taatgttact gtccaagttc tttctcaaga aaccacatct ggttcagaag 4621 agtgtcaagt tggactcttt gaactctgtt gctgtctgag caatcgtggt gcctagactt 4681 tgcattcctt gttctgttga cctgcataca tgtgagagct atttctttaa gaactatata 4741 ggctgtgaaa acgcactttc tttcccccaa agagctggga atttatgaag ttatggcaat 4801 gaactgcagc atgctgggac aattatttga ctactttttt ttgtaatatt gtcaaatgtc 4861 tctatggatt ctgacagaga tttctttttg ttttgttatt cttttggttg tcagtttcat 4921 tttaacgagt gtaactagta acattttatt ctttggattt tgtataatta cagtacatga 4981 ttgtgtattg tgacatgaat gctgtcaaaa tgacattgat ggcattgtga agcctgttac 5041 tttgtgtcac ttcctgataa ataagaggtg atgacatgga tatacaacag aaaacacttt 5101 gagttgaaag taaacacaag ctggctgctt ccctgtggca actgtgg //