LOCUS BC126173 2986 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 3,
mRNA (cDNA clone MGC:161451 IMAGE:8991889), complete cds.
ACCESSION BC126173
VERSION BC126173.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2986)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2986)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: C Column: 23.
FEATURES Location/Qualifiers
source 1..2986
/db_xref="H-InvDB:HIT000388765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161451 IMAGE:8991889"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCGACTTC"
gene 1..2986
/gene="KCTD3"
/gene_synonym="NY-REN-45"
/db_xref="GeneID:51133"
/db_xref="HGNC:HGNC:21305"
CDS 190..2637
/gene="KCTD3"
/gene_synonym="NY-REN-45"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 3"
/protein_id="AAI26174.1"
/db_xref="GeneID:51133"
/db_xref="HGNC:HGNC:21305"
/translation="MAGGHCGSFPAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFF
SSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGI
TPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTVRSADSRNGLNSTEGEAR
GNGTQPVLSGTGEETVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQ
VFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFS
LGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNN
GSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGT
SSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVT
RFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPIT
NKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQM
WDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSHLR
ESNSSLQLQHHDTTHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTINLNRNVER
AVPENGNLGPIQAEVKGATGECNISERKSPGVEIKSLRELDSGLEVHKIAEGFSESKK
RSSEDENENKIEFRKKGGFEGGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTT
PSPRHKKSDSSGQEYSL"
BASE COUNT 866 a 612 c 725 g 783 t
ORIGIN
1 gaaggggcag aagctagcga gccccgcccg gccgccggga aggtggggga agccccgtgc
61 accccccgcc ctccggccgc cgccgccccg ctggccctgc agccgtcgcc gctgcctcgg
121 gctacagccc cgggctcggc ggtcccggct ggggaaggag ggcggcgagc gcgtccggag
181 ccgccggaga tggcgggagg gcactgcggc agcttccccg cggcggcggc cggcagcggc
241 gagatcgtcc aactgaacgt aggggggacc agatttagta cctcaagaca aactcttatg
301 tggattccag attctttttt ttccagtttg ctgagtggga gaatttcaac acttcgagat
361 gaaactggtg ctatatttat tgatagagat ccagcagcat ttgcacccat tttaaatttt
421 cttcggacaa aagaactaga cttaagggga gtgagtatta atgttctcag gcatgaagca
481 gaattttacg ggatcactcc attagtaaga aggcttctct tatgtgaaga attggagcgt
541 tcctcttgtg gcagtgtcct ttttcatggt tacttgcccc caccaggtat tcctagtcgt
601 aaaataaaca acacagtcag atctgctgat tctaggaatg gtctaaattc tacagaaggt
661 gaagcccggg gaaatggtac acagcctgtt ctctctggaa cgggagaaga aactgttagg
721 ctaggatttc ctgtggatcc acgaaaggtg ctaatagtag ctggccatca caactggatt
781 gtagctgcat atgcccattt tgctgtgtgt tacagaatca aagaatcttc aggatggcag
841 caagtgttta cgagcccata tttggattgg actatcgaac gagtagcttt aaatgcaaag
901 gtggttggag ggccacatgg agacaaagac aaaatggttg ctgttgcctc agagagtagc
961 atcatcttgt ggagtgttca ggatggggga agtggaagtg aaattggagt gttcagcctg
1021 ggtgttcctg tagatgctct cttctttatt ggtaaccagt tggtggccac gagtcataca
1081 gggaaagtgg gagtgtggaa tgctgtcact cagcactggc aggttcaaga tgttgttcct
1141 ataactagtt atgacactgc tggatcattc cttctgcttg gatgtaacaa tggatcaata
1201 tattacatag atatgcagaa gttccccttg cgaatgaaag ataatgatct tcttgtaact
1261 gaactgtatc atgatccttc aaatgatgct attactgctc tgagtgttta cctcacaccc
1321 aaaacaagtg tcagtggtaa ctggatcgag atcgcctatg gtacgagctc tggagcagta
1381 cgagtgattg tacaacaccc agagacagtt gggtcaggtc ctcagctttt tcagactttc
1441 acagttcacc gaagtcccgt aacaaaaatc atgctatcag agaagcatct tgtatcagtc
1501 tgtgcagata ataatcatgt ccggacgtgg acagtaacac gattcagagg aatgatctct
1561 actcagccag gttctactcc tttagcgtca ttcaagatac tatccctgga ggagacagaa
1621 agtcatggta gctattcctc tggaaatgac ataggacctt ttggagagcg agacgatcaa
1681 caggtgttta tccagaaagt tgttcccatc accaacaaac tatttgtaag actctcatcg
1741 actggaaaaa gaatatgtga gatccaggct gttgactgta ctacaatatc ctcatttaca
1801 gtgagggaat gtgagggatc cagtaggatg ggctcaagac caaggcgcta cttgttcaca
1861 ggccatacaa atggcagtat tcaaatgtgg gatctgacca ctgctatgga tatggttaac
1921 aaaagtgaag ataaggatgt aggtggtcca accgaagaag agctactcaa attactcgat
1981 caatgtgatt tgagcacatc tcgctgtgct actcctaaca tcagtccagc aacttccgta
2041 gttcagcata gccacttacg agaatcaaat tctagccttc agcttcagca ccatgatacc
2101 acccatgaag cagctactta cggttccatg aggccttaca gagaaagtcc tttattagca
2161 agggcaagaa ggactgagag ctttcacagt tatagggact tccagactat taatttgaac
2221 agaaatgtag aaagagctgt ccctgaaaat ggtaacttgg gtccaataca agctgaagtg
2281 aaaggggcaa caggggaatg taatatatct gagagaaagt ctcctggagt agaaataaaa
2341 agtttgagag aattggatag tggattggaa gtgcataaaa tagctgaagg tttttcagaa
2401 tccaagaaaa ggtcatcaga agatgaaaat gaaaataaaa tagagtttag gaagaaagga
2461 ggatttgaag ggggaggatt ccttggaaga aagaaagttc cctatctggc atcatcacca
2521 agtacttccg atggaggaac tgactcacct ggtactgcgt ccccatctcc tacaaagact
2581 actccatctc ctcggcataa aaaaagtgat tcttcaggtc aggagtacag cttgtgaaaa
2641 ctcaccaaaa tgaatagttg tttcgttaca tttagatgaa agttaaactt tactgaattt
2701 cagtacatta gtttttacac taaaacttta caagataaaa ttggacttca tttagtatct
2761 ttttaacaga attacttgga ataatgagat acaataatca tatctctttt gacattttgg
2821 aaattttttt aattttacaa gtacatttaa cagatcattt ataaagcagg agtccatttt
2881 aacacttacc gacttttttt ggtttggaaa catattacca cgtcttaata ggatggtgcc
2941 catataggtg agcatccctt tagatcatgg gaaccagcag actgca
//