LOCUS BC126143 1396 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens ectodysplasin A, mRNA (cDNA clone MGC:161421
IMAGE:8991859), complete cds.
ACCESSION BC126143
VERSION BC126143.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1396)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1396)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: B Column: 17.
FEATURES Location/Qualifiers
source 1..1396
/db_xref="H-InvDB:HIT000388735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161421 IMAGE:8991859"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GTTCGCTC"
gene 1..1396
/gene="EDA"
/gene_synonym="ED1-A1"
/gene_synonym="ED1-A2"
/gene_synonym="EDA1"
/gene_synonym="HED"
/gene_synonym="XHED"
/gene_synonym="XLHED"
/db_xref="GeneID:1896"
/db_xref="HGNC:HGNC:3157"
/db_xref="MIM:300451"
CDS 193..1368
/gene="EDA"
/gene_synonym="ED1-A1"
/gene_synonym="ED1-A2"
/gene_synonym="EDA1"
/gene_synonym="HED"
/gene_synonym="XHED"
/gene_synonym="XLHED"
/codon_start=1
/product="ectodysplasin A"
/protein_id="AAI26144.1"
/db_xref="GeneID:1896"
/db_xref="HGNC:HGNC:3157"
/db_xref="MIM:300451"
/translation="MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFL
GFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTLSSLGGLDPDSPI
TSHLGQPSPKQQPLEPGEAALHSDSQDGHQMALLNFFFPDEKPYSEEESRRVRRNKRS
KSNEGADGPVKNKKKGKKAGPPGPNGPPGPPGPPGPQGPPGIPGIPGIPGTTVMGPPG
PPGPPGPQGPPGLQGPSGAADKAGTRENQPAVVHLQGQGSAIQVKNDLSGGVLNDWSR
ITMNPKVFKLHPRSGELEVLVDGTYFIYSQVEVYYINFTDFASYEVVVDEKPFLQCTR
SIETGKTNYNTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGEAPAS"
BASE COUNT 304 a 436 c 402 g 254 t
ORIGIN
1 ttcccacccc tcggagtaga gctgcacatg cggctgctcc ctgctccgtc ccgcccagcc
61 actgtcgcgc aggaacgggt ccctgcagcc cccagccgat ggcaggacag tagccgcctg
121 tcagaggtcg tgaacggctg aggcagacgc agcggctccc gggcctcaag agagtgggtg
181 tctccggagg ccatgggcta cccggaggtg gagcgcaggg aactcctgcc tgcagcagcg
241 ccgcgggagc gagggagcca gggctgcggg tgtggcgggg cccctgcccg ggcgggcgaa
301 gggaacagct gcctgctctt cctgggtttc tttggcctct cgctggccct ccacctgctg
361 acgttgtgct gctacctaga gttgcgctcg gagttgcggc gggaacgtgg agccgagtcc
421 cgccttggcg gctcgggcac ccctggcacc tctggcaccc taagcagcct cggtggcctc
481 gaccctgaca gccccatcac cagtcacctt gggcagccgt cacctaagca gcagccattg
541 gaaccgggag aagccgcact ccactctgac tcccaggacg ggcaccagat ggccctattg
601 aatttcttct tccctgatga aaagccatac tctgaagaag aaagtaggcg tgttcgccgc
661 aataaaagaa gcaaaagcaa tgaaggagca gatggcccag ttaaaaacaa gaaaaaggga
721 aagaaagcag gacctcctgg acccaatggc cctccaggac ccccaggacc tccaggaccc
781 cagggacccc caggaattcc agggattcct ggaattccag gaacaactgt tatgggacca
841 cctggtcctc caggtcctcc tggtcctcaa ggaccccctg gcctccaggg accttctggt
901 gctgctgata aagctggaac tcgagaaaac cagccagctg tggtgcatct acagggccaa
961 gggtcagcaa ttcaagtcaa gaatgatctt tcaggtggag tgctcaatga ctggtctcgc
1021 atcactatga accccaaggt gtttaagcta catccccgca gcggggagct ggaggtactg
1081 gtggacggca cctacttcat ctatagtcag gtagaagtat actacatcaa cttcactgac
1141 tttgccagct atgaggtggt ggtggatgag aagcccttcc tgcagtgcac acgcagcatc
1201 gagacgggca agaccaacta caacacttgc tataccgcag gcgtctgcct cctcaaggcc
1261 cggcagaaga tcgccgtcaa gatggtgcac gctgacatct ccatcaacat gagcaagcac
1321 accacgttct ttggggccat caggctgggt gaagcccctg catcctagat tccccccatt
1381 ttgcctctgt ccgtgc
//