LOCUS BC126113 1224 bp mRNA linear HUM 23-OCT-2006
DEFINITION Homo sapiens ataxin 7-like 3, mRNA (cDNA clone MGC:161391
IMAGE:8991829), complete cds.
ACCESSION BC126113
VERSION BC126113.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1224)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1224)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 7 Row: A Column: 11.
FEATURES Location/Qualifiers
source 1..1224
/db_xref="H-InvDB:HIT000388705"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:161391 IMAGE:8991829"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GATTCTAC"
gene 1..1224
/gene="ATXN7L3"
/gene_synonym="DKFZp761G2113"
/db_xref="GeneID:56970"
/db_xref="HGNC:HGNC:25416"
CDS 92..1135
/gene="ATXN7L3"
/gene_synonym="DKFZp761G2113"
/codon_start=1
/product="ATXN7L3 protein"
/protein_id="AAI26114.1"
/db_xref="GeneID:56970"
/db_xref="HGNC:HGNC:25416"
/translation="MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVK
CGYFFLDDTDPDSMKDFEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHL
EKCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKN
PNSPRRSKSLKHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVISEHTKK
MCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALISRLQWDG
SSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKP
PAPPTPSIYDDIN"
BASE COUNT 326 a 329 c 322 g 247 t
ORIGIN
1 cacaacaaca cccccacccc cgtgtgtgca gccgtgttgc cgcccgctgt gctatgagca
61 gtcagagcgc cgtctccaca agagtttaca aatgaaaatg gaggaaatgt ctttgtctgg
121 cctggataac agcaaactag aggccatcgc tcaggagata tacgcggacc tggtcgagga
181 ttcttgtttg ggattctgct ttgaggtaca ccgggctgtc aagtgtggct acttcttctt
241 ggacgacacg gaccctgata gcatgaagga ttttgagatc gtggaccagc cgggcttgga
301 catctttgga caggttttca accagtggaa gagcaaggag tgtgtttgcc ccaattgcag
361 tcgcagcatt gccgcctccc gctttgctcc ccatctggag aagtgcctgg gaatgggtcg
421 gaacagcagc cgaatcgcca accgccggat tgccaatagc aacaatatga ataagtctga
481 gagtgaccaa gaagataatg atgacatcaa tgacaacgac tggtcctatg gctcggagaa
541 gaaagccaag aagagaaagt cagacaagaa ccccaattcc cctcgaagat ccaagtcatt
601 aaaacacaaa aatggggaac ttagcaattc ggatcctttt aagtataaca attcaactgg
661 gatcagctat gagaccctgg ggccggagga gcttcgcagc ctgctaacca cgcaatgtgg
721 ggtgatttct gaacacacca agaagatgtg cacaaggtcc ctgcgctgcc cacagcacac
781 agatgagcag aggcgaaccg tacggattta ttttctcggg ccctcggctg tccttccaga
841 ggtcgagagc tccctggata atgacagctt tgacatgact gacagccagg ccctgatcag
901 ccggcttcag tgggacggct cctctgacct ctcaccctct gattcaggct cctccaagac
961 gagtgaaaat cagggatggg gtctaggtac caacagctct gagtcacgga aaaccaagaa
1021 aaagaaatcc catctgagcc tggtagggac tgcctccggc ctaggttcca acaagaagaa
1081 gaagccaaag ccaccggcac ccccgacgcc cagcatctat gatgacatca actgacttgg
1141 gtgcaaggga tagcctttgg ctgagcagag ccctctctcc tgacccccac ccaggtggca
1201 tagcctggca aatggacggc tgct
//