LOCUS BC125274 2079 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ankyrin repeat and LEM domain containing 1, mRNA (cDNA
clone MGC:141893 IMAGE:40085198), complete cds.
ACCESSION BC125274
VERSION BC125274.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2079)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2079)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..2079
/db_xref="H-InvDB:HIT000388694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141893 IMAGE:40085198"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AGATATCC"
gene 1..2079
/gene="ANKLE1"
/gene_synonym="LEM3"
/gene_synonym="LEMD6"
/db_xref="GeneID:126549"
/db_xref="HGNC:HGNC:26812"
CDS 45..1781
/gene="ANKLE1"
/gene_synonym="LEM3"
/gene_synonym="LEMD6"
/codon_start=1
/product="ANKLE1 protein"
/protein_id="AAI25275.1"
/db_xref="GeneID:126549"
/db_xref="HGNC:HGNC:26812"
/translation="MCSEARLARRAVEELLRCGTDPNLVLEDGAAAVHLAAGARHPRG
LRCLGALLRQGGDPNVRSVEALTPLHVAAAWGCRRGLEQLLSQGADPALRDQDGLRPL
DLALQQGHLECARVLQDLDTRTRTRTRIGAETQEPEPAPGTPGLSGPTDETLDSIALQ
KQPCRGDNRDIGWEADPGPPSLPVPLETVDKHGSSASPPGHWDYSSDASFVTAVEVSG
AEDPASDTPPWAGSLPPTRQGLLHVVHANQRVPRSQGTEAELNARLQALTLTPPNAAG
FQSSPSSMPLLDRSPAHSPPRTPPPGASDCHCLWEHQTSIDSDMATLWLTEDEASSTG
GREPVGPCRHLPVSTVSDLELLKGLRALGPEFSGHSLELAAALRTGCIPDVQADEDTL
AQQFERPDPARRWREGVVKSSFTYLLLDPRETQDLPARAFSLTPAERLQTFIRAIFYV
GKGTRARPYVHLWEALGHHGRSRKQPHQACPKVRQILDIWASGCGVVSLHCFQHVVAV
EAYTREACIVEALGIQTLTNQKQGHCYGVVAGWPPARRRRLGVHLLHRALLVFLAEGE
RQLHPQDIQARG"
BASE COUNT 379 a 639 c 675 g 386 t
ORIGIN
1 ggaaatcgac cgaccaggcg gtgcgcttcg gacccagcca gggcatgtgc tcggaggccc
61 gcctggctcg cagggcagta gaggagctgc tgcgctgcgg cacggaccct aatttggtgc
121 tagaggacgg cgcagcggct gtgcacttgg cggccggagc ccggcacccg cgcggcctgc
181 gttgcctcgg ggccctactg cgccaaggcg gggaccccaa cgttcgatct gtcgaggcac
241 tgacgccgct gcatgtggcc gccgcctggg gctgccgccg cggcctggag cagctgctga
301 gccaaggagc ggacccggcg ctgcgcgacc aggacggact ccggccgctg gacctggccc
361 tgcagcaggg acacctggag tgcgcgcgag tcctgcagga tctcgacacg cggaccagga
421 cccggacccg gatcggggca gagactcagg agcccgagcc tgcacctggc accccaggcc
481 tctctggacc taccgatgag acgctggact ccatagcact ccaaaagcag ccatgcagag
541 gtgacaacag ggacattggc tgggaggctg acccaggacc ccccagcctc cctgttcccc
601 ttgaaactgt ggacaaacat gggagctcgg cgtcccctcc agggcactgg gattacagct
661 cagacgcctc tttcgtcaca gcggttgagg tctctggagc tgaggaccca gcctcggaca
721 ctcccccctg ggctgggtca ttgccaccga ccaggcaggg acttctgcat gttgtccatg
781 ccaaccagag ggtacctagg tctcagggca cggaggcaga actgaatgcc cgtctgcagg
841 ccctgactct gaccccacca aatgctgctg gcttccagtc ctccccttcc tccatgcctc
901 tcctggacag gagtccagct catagccccc cacggacacc accccctgga gcttctgact
961 gccactgcct gtgggagcac cagacatcca ttgatagtga catggccacg ctctggctga
1021 cagaggatga ggcaagctct acaggtggca gggaacctgt cggcccttgc cggcacctgc
1081 cagtctccac tgtgtctgac ttggagttgc tgaagggact ccgagcactt ggcccagagt
1141 tttcagggca cagcctagaa ctggctgcag ccctgcggac gggctgtatt ccagatgtcc
1201 aggcagatga agacacgctg gcccagcagt ttgagcggcc agatcctgcc aggaggtggc
1261 gggagggggt cgtgaagtct agcttcacgt atctgctgct ggaccccagg gagactcagg
1321 acctgccagc ccgagccttc tcactgaccc cagctgagcg ccttcagact ttcatccgtg
1381 ccatcttcta cgtgggcaaa gggacgaggg cccggccata tgtccacctc tgggaggccc
1441 ttggtcacca tgggcggtca agaaaacagc cccaccaggc ctgccccaag gtgcgtcaga
1501 tcttggacat ctgggccagt ggttgcggcg ttgtgtccct acattgcttc cagcacgtgg
1561 tcgctgtgga ggcttataca cgggaggcgt gtattgtgga agccctaggg atccagacgc
1621 tcaccaacca gaagcaaggg cactgctatg gagtggtggc aggctggcca cctgctcgtc
1681 gccggcgctt gggggtgcac ctgctgcacc gtgccctcct tgtcttcctg gctgaaggcg
1741 agcgacagct tcatccccag gacatccagg cccggggctg agtgctgggg agttggccat
1801 ccagcctggg gagaaatgtt tgaatgttcc agctgcccca tgctgacagc agcccccatc
1861 tctggtttca gaaggggtgt gtgtgtgtgt gtgtgtgttt gtgtgtgtgt gtgtgtgtgt
1921 gtgtgtgtgt gtgtgtgtag ggagcaccca ggcagatctc ccccaggctg agagaggact
1981 ttgttacaga tggtactgct ggagaggtag taagtagtga gctccccatc gtgggaggag
2041 gacaagaagg gaagcagaag gtgctttgga acagtccgg
//