LOCUS BC125201 3101 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens schlafen family member 5, mRNA (cDNA clone MGC:150612
IMAGE:40123372), complete cds.
ACCESSION BC125201
VERSION BC125201.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: m Column: 18.
FEATURES Location/Qualifiers
source 1..3101
/db_xref="H-InvDB:HIT000388652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150612 IMAGE:40123372"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GACATTTT sequenced from
the forward primer"
gene 1..3101
/gene="SLFN5"
/gene_synonym="MGC19764"
/db_xref="GeneID:162394"
/db_xref="HGNC:HGNC:28286"
CDS 54..2729
/gene="SLFN5"
/gene_synonym="MGC19764"
/codon_start=1
/product="SLFN5 protein"
/protein_id="AAI25202.1"
/db_xref="GeneID:162394"
/db_xref="HGNC:HGNC:28286"
/translation="MSLRIDVDTNFPECVVDAGKVTLGTQQRQEMDPRLREKQNEIIL
RAVCALLNSGGGIIKAEIENKGYNYERHGVGLDVPPIFRSHLDKMQKENHFLIFVKSW
NTEAGVPLATLCSNLYHRERTSTDVMDSQEALAFLKCRTQTPTNINVSNSLGPQAAQG
SVQYEGNINVSAAALFDRKRLQHLEKLNLPESTHVEFVMFSTDVSHCVKDRLPKCVSA
FANTEGGYVFFGVHDETCQVIGCEKEKIDLTSLRASIDGCIKKLPVHHFCTQRPEIKY
VLNFLEVHDKGALRGYVCAIKVEKFCCAVFAKVPSSWQVKDNRVRQLPTREWTAWMME
ADPDLSRCPEMVLQLSLSSATPRSKPVCIHKNSECLKEQQKRYFPVFSDRVVYTPESL
YKELFSQHKGLRDLINTEMRPFSQGILIFSQSWAVDLGLQEKQGVICDALLISQNNTP
ILYTIFSKWDAGCKGYSMIVAYSLKQKLVNKGGYTGRLCITPLVCVLNSDRKAQSVYS
SYLQIYPESYNFMTPQHMEALLQSLVIVLLGFKSFLSEELGSEVLNLLTNKQYELLSK
NLRKTRELFVHGLPGSGKTILALRIMEKIRNVFHCEPANILYICENQPLKKLVSFSKK
NICQPVTRKTFMKNNFEHIQHIIIDDAQNFRTEDGDWYGKAKFITQTARDGPGVLWIF
LDYFQTYHLSCSGLPPPSDQYPREEINRVVRNAGPIANYLQQVMQEARQNPPPNLPPG
SLVMLYEPKWAQGVPGNLEIIEDLNLEEILIYVANKCRFLLRNGYSLKDIAVLFTKAS
EVEKYKDRLLTAMRKRKLSQLHEESDLLLQIGDASDVLTDHIVLDSVCRFSGLERNIV
FGINPGVAPPAGAYNLLLCLASRAKRHLYILKASV"
BASE COUNT 879 a 641 c 760 g 821 t
ORIGIN
1 gagaacccag cgggagaaca tttcaggata ggaataggcc aagtgctgag aagatgagtc
61 ttaggattga tgtggataca aactttcctg agtgtgttgt agatgcagga aaagtcaccc
121 ttgggactca gcagaggcag gagatggacc ctcgcctgcg ggagaaacag aatgaaatca
181 tcctgcgagc agtatgtgct ctgctgaatt ctggtggggg cataatcaag gctgagattg
241 agaacaaagg ctacaattat gaacgtcatg gagtaggatt ggatgtgcct ccaattttca
301 gaagccattt agataagatg cagaaggaaa accacttttt gatttttgtg aaatcatgga
361 acacagaggc tggtgtgcca cttgctacct tatgctccaa tttgtaccac agagagagaa
421 catccaccga tgtcatggat tctcaggaag ctctggcatt cctcaaatgc aggactcaga
481 ctccaacgaa tattaatgtt tccaattcat taggtccaca ggcagctcag ggtagtgtac
541 aatatgaagg taacataaat gtgtcagctg ctgctttatt tgatagaaag cggcttcagc
601 atctggaaaa actcaacctt cctgagtcca cacatgttga atttgtaatg ttctcgacag
661 acgtgtcaca ctgtgttaaa gacagacttc cgaagtgtgt ttctgcattt gcaaatactg
721 aaggaggata tgtatttttt ggtgtgcatg atgagacttg tcaagtgatt ggatgtgaaa
781 aagagaaaat agaccttacg agcttgaggg cttctattga tggctgtatt aagaagctac
841 ctgtccatca tttctgcaca cagaggcctg agataaaata tgtccttaac ttccttgaag
901 tgcatgataa gggggccctc cgtggatatg tctgtgcaat caaggtggag aaattctgct
961 gtgcggtgtt tgccaaagtg cctagttcct ggcaggtgaa ggacaaccgt gtgagacaat
1021 tgcccacaag agaatggact gcttggatga tggaagctga cccagacctt tccaggtgtc
1081 ctgagatggt tctccagttg agtttgtcat ctgccacgcc ccgcagcaag cctgtgtgca
1141 ttcataagaa ttcggaatgt ctgaaagagc agcagaaacg ctactttcca gtattttcag
1201 acagagtggt atatactcca gaaagcctct acaaggaact cttctcacaa cataaaggac
1261 tcagagactt aataaataca gaaatgcgcc ctttctctca aggaatattg attttttctc
1321 aaagctgggc tgtggattta ggtctgcaag agaagcaggg agtcatctgt gatgctcttc
1381 taatttccca gaacaacacc cctattctct acaccatctt cagcaagtgg gatgcggggt
1441 gcaagggcta ttctatgata gttgcctatt ctttgaagca gaagctggtg aacaaaggcg
1501 gctacactgg gaggttatgc atcaccccct tggtctgtgt gctgaattct gatagaaaag
1561 cacagagcgt ttacagttcg tatttacaaa tttaccctga atcctataac ttcatgaccc
1621 cccagcacat ggaagccctg ttacagtccc tcgtgatagt cttgcttggg ttcaaatcct
1681 tcttaagtga agagctgggc tctgaggttt tgaacctact gacaaataaa cagtatgagt
1741 tgctttcaaa gaaccttcgc aagaccagag agttgtttgt tcatggctta cctggatcag
1801 ggaagactat cttggctctt aggatcatgg agaagatcag gaatgtgttt cactgtgaac
1861 cggctaacat tctctacatc tgtgaaaacc agcccctgaa gaagttggtg agtttcagca
1921 agaaaaacat ctgccagcca gtgacccgga aaaccttcat gaaaaacaac tttgaacaca
1981 tccagcacat tatcattgat gacgctcaga atttccgtac tgaagatggg gactggtatg
2041 ggaaagcaaa gttcatcact cagacagcaa gggatggccc aggagttctc tggatctttc
2101 tggactactt tcagacctat cacttgagtt gcagtggcct cccccctccc tcagaccagt
2161 atccaagaga agagatcaac agagtggtcc gcaatgcagg tccaatagct aattacctac
2221 aacaagtaat gcaggaagcc cgacaaaatc ctccacctaa cctcccccct gggtccctgg
2281 tgatgctcta tgaacctaaa tgggctcaag gtgtcccagg caacttagag attattgaag
2341 acttgaactt ggaggagata ctgatctatg tagcgaataa atgccgtttt ctcttgcgga
2401 atggttattc tctgaaggat attgctgtgc ttttcaccaa agcaagtgaa gtggaaaaat
2461 ataaagacag gcttctaaca gcaatgagga agagaaaact gtctcagctc catgaggagt
2521 ctgatctgtt actacagatc ggtgatgcgt cggatgttct aaccgatcac attgtgttgg
2581 acagtgtctg tcgattttca ggcctggaaa gaaatatcgt gtttggaatc aatccaggag
2641 tagccccacc ggctggggcc tacaatcttc tgctctgttt ggcttctagg gcaaaaagac
2701 atctgtatat tctgaaggct tctgtgtgac aggaaaccca agcctaagaa acaattaagt
2761 ggttctcatc tctaattaac tgtgaaacca tttaatccaa acatgtaagc acacactcac
2821 ttattaagtc acatactttt ctaggtgctg gggattgaga acgaatcgat gtaagattcc
2881 tcctttaggg cagagacaga ccactgacaa atacacagat agacaaggaa tttcccatgg
2941 taaaaaggga tatcagtaat tagaggaccg tgagactcag agatgtgtgt gtgtgtgtgt
3001 gtgtgtgtgt gtgtgtgtgt gtgtgtgcgc gcgcgcgcgc acgtgcacat gtgtgtaggt
3061 agatggaggg ggtgattatt ttgggtggtc agggaagtgc t
//