LOCUS BC125166 1618 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens solute carrier family 7, (cationic amino acid
transporter, y+ system) member 13, mRNA (cDNA clone MGC:150477
IMAGE:40121189), complete cds.
ACCESSION BC125166
VERSION BC125166.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: h Column: 24.
FEATURES Location/Qualifiers
source 1..1618
/db_xref="H-InvDB:HIT000388619"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150477 IMAGE:40121189"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTTCCCTA sequenced from the reverse primer"
gene 1..1618
/gene="SLC7A13"
/gene_synonym="AGT-1"
/gene_synonym="AGT1"
/gene_synonym="XAT2"
/db_xref="GeneID:157724"
/db_xref="HGNC:HGNC:23092"
CDS 84..1385
/gene="SLC7A13"
/gene_synonym="AGT-1"
/gene_synonym="AGT1"
/gene_synonym="XAT2"
/codon_start=1
/product="SLC7A13 protein"
/protein_id="AAI25167.1"
/db_xref="GeneID:157724"
/db_xref="HGNC:HGNC:23092"
/translation="MDRGEKIQLKRVFGYWWGTSFLLINIIGAGIFVSPKGVLAYSCM
NVGVSLCVWAGCAILAMTSTLCSAEISISFPCSGAQYYFLKRYFGSTVAFLNLWTSLF
LGSGVVAGQALLLAEYSIQPFFPSCSVPKLPKKCLALAMLWIVGILTSRGVKEVTWLQ
IASSVLKVSILSFISLTGVVFLIRGKKENVERFQNAFDAELPDISHLIQAIFQGYFAY
SGELKKPRTTIPKCIFTALPLVTVVYLLVNISYLTVLTPREILSSDAVAITWADRAFP
SLAWIMPFAISTSLFSNLLISIFKSSRPIYLASQEGQLPLLFNTLNSHSSPFTAVLLL
VTLGSLAIILTSLIDLINYIFFTGSLWSILLMIGILRRRYQEPNLSIPYKSLILVVQA
GEAGVQWHDLGLLQPLLPGFKRFSCLSLPSSWDYRCFCHFH"
BASE COUNT 408 a 332 c 336 g 542 t
ORIGIN
1 tccatcaaca tcctttgcag ctacataggc aggaaaatct agaaattgta atttatatag
61 aattttaaaa ctcttcaatt acaatggata gaggggagaa aatacagctc aagagagtgt
121 ttggatattg gtggggcaca agttttttgc ttattaatat cattggtgca ggaatttttg
181 tgtcccccaa aggtgtgttg gcatactctt gcatgaacgt gggagtctcc ctgtgcgttt
241 gggctggctg tgccatactg gccatgacat caactctttg ctctgcagag ataagtataa
301 gcttcccatg cagtggagct caatactatt ttctcaagag atactttggc tccacggttg
361 cttttttgaa tctctggaca tccttgtttc tggggtcagg ggtagttgct ggccaagctc
421 tgctccttgc tgagtacagc atccagcctt tttttcccag ctgctctgtc ccaaagctgc
481 ctaagaaatg tctggcattg gccatgttgt ggattgtagg aattctgact tctcgtggtg
541 tgaaagaagt gacttggctt cagatagcta gctcagtgct gaaagtgtcc atacttagct
601 tcatttccct aactggagta gtgttcctga taagagggaa aaaggagaat gtagaacgat
661 ttcagaatgc ttttgatgct gaacttccag atatctctca ccttatacaa gccatcttcc
721 aaggatattt tgcatattca ggggagctga agaagcccag aacaacaatt cccaaatgca
781 tatttactgc gttacctctg gtgactgtag tttatttact ggttaacatt tcctatctga
841 ctgttctgac acccagggaa attctctctt cagatgctgt agctatcaca tgggctgatc
901 gagcttttcc ctcattagca tggattatgc cttttgctat ttctacctca ttatttagca
961 accttctgat ttctatattt aaatcttcga gaccaatata tcttgcaagc caagagggcc
1021 agctgccttt gctatttaat acacttaata gtcactcttc tccatttaca gctgtgctac
1081 tacttgtcac tttgggatcc cttgcaatta tcttaacaag tctaattgat ttgataaact
1141 atattttttt cacgggttca ttatggtcta tattattaat gataggaata ctaaggcgga
1201 gataccagga acccaatcta tctatacctt ataagagtct cattcttgtc gtccaggctg
1261 gagaagctgg agtgcagtgg catgatcttg gcttgctgca acctctgctt cctgggttca
1321 agagattctc ctgcctcagc ctcccaagta gctgggatta caggtgtttt tgtcatttcc
1381 attagcaaca atagtcatcg acgtgggctt ggttgtgata ccattggtaa agtctccaaa
1441 tgtgcattat gtctacgtgc ttctgttagt tctcagcgga ttactatttt acataccttt
1501 aatacatttt aaaataagat tggcttggtt tgagaagacg acttgctatt tacaattact
1561 atttaatatt tgcctccctg atgtgtctga ggaatagatg tcggaagtgc aaactctt
//