LOCUS BC125135 890 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens C-reactive protein, pentraxin-related, mRNA (cDNA clone MGC:149895 IMAGE:40119392), complete cds. ACCESSION BC125135 VERSION BC125135.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 890) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 890) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 27 Row: p Column: 11. FEATURES Location/Qualifiers source 1..890 /db_xref="H-InvDB:HIT000388588" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:149895 IMAGE:40119392" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TACTATTA sequenced from the reverse primer" gene 1..890 /gene="CRP" /gene_synonym="PTX1" /db_xref="GeneID:1401" /db_xref="HGNC:HGNC:2367" /db_xref="MIM:123260" CDS 33..707 /gene="CRP" /gene_synonym="PTX1" /codon_start=1 /product="C-reactive protein, pentraxin-related" /protein_id="AAI25136.1" /db_xref="GeneID:1401" /db_xref="HGNC:HGNC:2367" /db_xref="MIM:123260" /translation="MEKLLCFLVLTSLSHAFGQTDMSRKAFVFPKESDTSYVSLKAPL TKPLKAFTVCLHFYTELSSTRGYSIFSYATKRQDNEILIFWSKDIGYSFTVGGSEILF EVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLKKGYTVGAEASIILGQEQDSF GGNFEGSQSLVGDIGNVNMWDFVLSPDEINTIYLGGPFSPNVLNWRALKYEVQGEVFT KPQLWP" BASE COUNT 195 a 222 c 240 g 233 t ORIGIN 1 ggcccttgta tcactggcag caggacgtga ccatggagaa gctgttgtgt ttcttggtct 61 tgaccagcct ctctcatgct tttggccaga cagacatgtc gaggaaggct tttgtgtttc 121 ccaaagagtc ggatacttcc tatgtatccc tcaaagcacc gttaacgaag cctctcaaag 181 ccttcactgt gtgcctccac ttctacacgg aactgtcctc gacccgtggg tacagtattt 241 tctcgtatgc caccaagaga caagacaatg agattctcat attttggtct aaggatatag 301 gatacagttt tacagtgggt gggtctgaaa tattattcga ggttcctgaa gtcacagtag 361 ctccagtaca catttgtaca agctgggagt ccgcctcagg gatcgtggag ttctgggtag 421 atgggaagcc cagggtgagg aagagtctga agaagggata cactgtgggg gcagaagcaa 481 gcatcatctt ggggcaggag caggattcct tcggtgggaa ctttgaagga agccagtccc 541 tggtgggaga cattggaaat gtgaacatgt gggactttgt gctgtcacca gatgagatta 601 acaccatcta tcttggcggg cccttcagtc ctaatgtcct gaactggcgg gcactgaagt 661 atgaagtgca aggcgaagtg ttcaccaaac cccagctgtg gccctgaggc ccagctgtgg 721 gtcctgaagg tacctcccgg ttttttacac cgcatgggcc ccacgtctct gtctctggta 781 cctcccgctt ttttacactg catggttccc acgtctctgt ctctgggcct ttgttcccct 841 atatgcattg caggcctgct ccaccctcct cagcgcctga gaatggaggt //