LOCUS BC125106 2491 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens SH3 domain containing ring finger 2, mRNA (cDNA clone MGC:149788 IMAGE:40118357), complete cds. ACCESSION BC125106 VERSION BC125106.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2491) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2491) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 27 Row: m Column: 5. FEATURES Location/Qualifiers source 1..2491 /db_xref="H-InvDB:HIT000388559" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:149788 IMAGE:40118357" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TGCTCAA sequenced from the forward primer" gene 1..2491 /gene="SH3RF2" /gene_synonym="FLJ23654" /gene_synonym="RNF158" /db_xref="GeneID:153769" /db_xref="HGNC:HGNC:26299" CDS 196..2385 /gene="SH3RF2" /gene_synonym="FLJ23654" /gene_synonym="RNF158" /codon_start=1 /product="SH3 domain containing ring finger 2" /protein_id="AAI25107.1" /db_xref="GeneID:153769" /db_xref="HGNC:HGNC:26299" /translation="MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRVFKAH KELRCPECRTPVFSNIEALPANLLLVRLLDGVRSGQSSGRGGSFRRPGTMTLQDGRKS RTNPRRLQASPFRLVPNVRIHMDGVPRAKALCNYRGQNPGDLRFNKGDIILLRRQLDE NWYQGEINGISGNFPASSVEVIKQLPQPPPLCRALYNFDLRGKDKSENQDCLTFLKDD IITVISRVDENWAEGKLGDKVGIFPILFVEPNLTARHLLEKNKGRQSSCTKNLSLVSS SSRGNTSTLRRGPGSRRKVPGQFSITTALNTLNRMVHSPSGRHMVEISTPVLISSSNP SVITQPMEKADVPSSCVGQVSTYHPAPVSPGHSTAVVSLPGSQQHLSANMFVALHSYS AHGPDELDLQKGEGVRVLGKCQDGWLRGVSLVTGRVGIFPNNYVIPIFRKTSSFPDSR SPGLYTTWTLSTSSVSSQGSISEGDPRQSRPFKSVFVPTAIVNPVRSTAGPGTLGQGS LRKGRSSMRKNGSLQRPLQSGIPTLVVGSLRRSPTMVLRPQQFQFYQPQGIPSSPSAV VVEMGSKPALTGEPALTCISRGSEARIHSAASSLIMEDKEIPIKSEPLPKPPASAPPS ILVKPENSRNGIEKQVKTVRFQNYSPPPTKHYTSHPTSGKPEQPATLKASQPEAASLG PEMTVLFAHRSGCHSGQQTDLRRKSALAKATTLVSTASGTQTVFPSK" BASE COUNT 591 a 777 c 640 g 483 t ORIGIN 1 aggaaaggaa gccggttgga gggcgcagcg cacccctgct gcgcggagga gggggctgag 61 ctgaactcag cagaagttac atgcacaagg caaaaattct gacgttctca agagaccagc 121 tctgcccccg tggctcaact gaccctacca tgtggacgct gctcctccag gtgggaactg 181 gagttttgaa ataaaatgga tgatttgacg ttacttgatc ttctggagtg ccctgtgtgc 241 tttgagaagc tcgatgtcac agccaaagtc ctcccttgcc agcacacctt ctgcaaacca 301 tgtctacaga gggttttcaa ggcccacaaa gagctgcggt gccccgaatg caggacgcct 361 gtgttttcca acattgaggc gctgccggcc aacctgctgc tcgtgcgcct tctggatgga 421 gtgcgctcag ggcagagctc cgggagaggg ggctccttcc gcaggcctgg cacgatgacc 481 ttgcaggatg gcaggaaaag caggaccaac cccagacgtc tgcaggccag tcctttccgg 541 ctagtgccta atgtcagaat ccacatggat ggggtgcctc gagcaaaggc cttatgcaac 601 tacagagggc agaatcccgg tgacctaagg tttaataagg gagatatcat ccttctccgg 661 agacagcttg atgagaattg gtaccagggg gaaatcaatg gcatcagcgg gaacttccca 721 gccagctccg tggaagtcat caagcagctg ccccagccgc ccccgctctg cagggccctc 781 tacaacttcg acctacgagg caaggacaag agtgagaacc aggattgcct gaccttcctc 841 aaggacgata tcatcactgt gatcagccga gtggatgaga actgggcaga aggcaagtta 901 ggagataaag taggcatctt ccctatcttg tttgtagagc caaacctcac cgcaagacac 961 cttttagaga agaacaaagg tcgccagtca tcctgcacaa aaaacctgtc cctggtgtcc 1021 tcgtcctcca gaggcaacac gtctaccctc cgtaggggcc cagggtccag gaggaaggtg 1081 cctgggcagt tttccatcac aacagccttg aacactctca accggatggt ccattctcct 1141 tcagggcgcc atatggtaga gatcagcacc ccagtgctca tcagctccag caacccctct 1201 gtgatcaccc agcccatgga gaaagcagac gttccttcca gctgtgtggg acaggtcagc 1261 acttatcacc ccgcacctgt ctctccagga cattccacag ccgtggtcag tctgcctggc 1321 tcccagcaac acctctcagc gaacatgttt gtagccctgc actcctactc agcccatgga 1381 cccgatgagc tggacctgca aaagggagaa ggcgtcaggg tcctggggaa gtgccaggac 1441 ggctggctca ggggcgtctc cttggtcacc gggcgagtcg gcatcttccc aaacaattac 1501 gtcatcccca ttttcagaaa gacctctagt tttccagact cccggagccc tggtctctac 1561 accacatgga cgttatccac ctcctctgtg tcctcccaag gcagcatttc agaaggtgat 1621 ccacggcaaa gccgtccctt caaatccgtc tttgtgccca ctgccatagt caaccccgtg 1681 agaagcacag ccggccctgg gactttagga caagggtctc ttcggaaagg gcggagcagc 1741 atgagaaaga atggatccct gcagagaccc ctccagtccg ggatccccac tctcgtggta 1801 ggctccctca gacgcagccc caccatggtc cttcggcctc agcagttcca attctaccag 1861 ccacagggga tcccctcctc cccctcagcc gtggtggtgg agatggggtc caagcctgcc 1921 ctcacggggg agcccgccct cacgtgcatc agcaggggca gtgaggcccg gatccactcc 1981 gcggccagct ccctcattat ggaagacaaa gaaatcccca tcaagagtga gcctctgcca 2041 aaaccgcccg catctgcccc accatccatc ctggtgaaac cagaaaactc aagaaatggc 2101 atcgaaaagc aagtcaaaac cgtgagattt cagaattaca gccctcctcc caccaaacat 2161 tacacctccc atcccacctc cggaaagcct gaacagccag ccaccctcaa ggcgtcccag 2221 cctgaagcag cgtccttggg cccagagatg accgtcctat ttgcccaccg aagtggctgc 2281 cactccggac agcagacaga cctccggaga aagtcagctc ttgccaaggc cacaaccctg 2341 gtgtccactg cctcaggcac gcagaccgtg tttcccagca aatgaaccta cgggtggctt 2401 ttcctagacc ccaaagaggt gaattgcatt taaatacagt ctgcctccac tgagggcatc 2461 ctgccattct ttggggactt gagcatgggt a //