LOCUS BC125098 2381 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens NADPH oxidase, EF-hand calcium binding domain 5, mRNA
(cDNA clone MGC:149777 IMAGE:40118288), complete cds.
ACCESSION BC125098
VERSION BC125098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2381)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2381)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: l Column: 24.
FEATURES Location/Qualifiers
source 1..2381
/db_xref="H-InvDB:HIT000388551"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149777 IMAGE:40118288"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGCAA sequenced from
the reverse primer"
gene 1..2381
/gene="NOX5"
/gene_synonym="NOX5A"
/gene_synonym="NOX5B"
/db_xref="GeneID:79400"
/db_xref="HGNC:HGNC:14874"
/db_xref="MIM:606572"
CDS 193..2352
/gene="NOX5"
/gene_synonym="NOX5A"
/gene_synonym="NOX5B"
/codon_start=1
/product="NOX5 protein"
/protein_id="AAI25099.1"
/db_xref="GeneID:79400"
/db_xref="HGNC:HGNC:14874"
/db_xref="MIM:606572"
/translation="MSAEEDARWLRWVTQQFKTIAGEDGEISLQEFKAALHVKESFFA
ERFFALFDSDRSGTITLQELQEALTLLIHGSPMDKLKFLFQVYDIDGSGSIDPDELRT
VLQSCLRESAISLPDEKLDQLTLALFESADADGNGAITFEELRDELQRFPGVMENLTI
SAAHWLTAPAPRPRPRRPRQLTRAYWHNHRSQLFCLATYAGLHVLLFGLAASAHRDLG
ASVMVAKSCGQCLNFDCSFIAVLMLRRCLTWLRATWLAQVLPLDQNIQFHQLMGYVVV
GLSLVHTVAHTVNFVLQAQAEASPFQFWELLLTTRPGIGWVHGSASPTGVALLLLLLF
MFICSSSCIRRSGHFEVFYWTHLSYLLVWLLLIFHGPNFWKWLLVPGILFFLEKAIGL
AVSRMAAVCIMEVNLLPSKVTHLLIKRPPFFHYRPGDYLYLNIPTIARYEWHPFTISS
APEQKDTIWLHIRSQGQWTNRLYESFKASDPLGRGSKRLSRSVTMRKSQRSSKGSEIL
LEKHKFCNIKCYIDGPYGTPTRRIFASEHAVLIGAGIGITPFASILQSIMYRHQKRKH
TCPSCQHSWIEGVQDNMKLHKVDFIWINRDQRSFEWFVSLLTKLEMDQAEEAQYGRFL
ELHMYMTSALGKNDMKAIGLQMALDLLANKEKKDSITGLQTRTQPGRPDWSKVFQKVA
AEKKGKVQVFFCGSPALAKVLKGHCEKFGFRFFQENF"
BASE COUNT 479 a 718 c 655 g 529 t
ORIGIN
1 gagtgctacg gacgacgcct atgaagccct tagtccttct agttgcgctt ttgctatggc
61 cttcgtctgt gccggcttat ccgaggtctc aatccattgc gcccaggctg gtatgcagtc
121 atgttgtatc tggaattggt gggttcttgg tctcactgac ttcaagaatg aagccgcaga
181 ccctcgtgca ccatgagtgc cgaggaggat gccaggtggc tccggtgggt gactcagcag
241 tttaagacca ttgcaggaga agatggggag atcagcctgc aagaattcaa agcagctctg
301 catgtgaaag agtccttctt tgcagagcga ttctttgccc tatttgactc cgatagaagt
361 ggcaccatca ccctccagga gctgcaggag gcactgaccc tgctcatcca tggcagcccc
421 atggacaaac tcaaattcct cttccaggtg tatgacatcg atggcagtgg ctccattgac
481 ccggatgagc tgcgcactgt gctgcagtcg tgtctgcgcg agagcgccat ctcgctgcct
541 gacgagaagc tggaccagct gacgctggcg ctcttcgaat cggccgacgc ggacggcaac
601 ggggccatca ccttcgagga gctccgggac gagctgcagc gcttccccgg agtcatggag
661 aacctgacca tcagcgctgc ccactggctg acggcccccg ccccccgccc acgcccgcgc
721 cggccgcgcc agctgacccg cgcctactgg cacaaccacc gcagccagct gttctgcctg
781 gccacctatg caggcctcca cgtgctgctc ttcgggctgg cggccagcgc gcaccgggac
841 ctcggcgcca gcgtcatggt ggccaagagc tgtggccagt gcctcaactt cgactgcagc
901 ttcatcgcgg tgctgatgct cagacgctgc ctcacctggc tgcgggccac gtggctggct
961 caagtcctac cactggacca gaacatccag ttccaccagc ttatgggcta cgtggtagtg
1021 gggctgtccc tcgtgcacac tgtggctcac actgtgaact ttgtactcca ggctcaggcg
1081 gaggccagcc ctttccagtt ctgggagctg ctgctcacca cgaggcctgg cattggctgg
1141 gtacacggtt cggcctcccc gacaggtgtc gctctgctgc tgctgctcct cttcatgttc
1201 atctgctcca gttcctgcat ccgcaggagt ggccactttg aggtgttcta ttggactcac
1261 ctgtcctacc tcctcgtgtg gcttctgctc atctttcatg ggcccaactt ctggaagtgg
1321 ctgctggtgc ctggaatctt gtttttcctg gagaaggcca tcggactggc agtgtcccgc
1381 atggcagccg tgtgcatcat ggaagtcaac ctcctcccct ccaaggtcac tcatctcctc
1441 atcaagcggc cccctttttt tcactataga cctggtgact acttgtatct gaacatcccc
1501 accattgctc gctatgagtg gcaccccttc accatcagca gtgctcctga gcagaaagac
1561 actatctggc tgcacattcg gtcccaaggc cagtggacaa acaggctgta tgagtccttc
1621 aaggcatcag acccactggg ccgtggttct aagaggctgt cgaggagtgt gacaatgaga
1681 aagagtcaaa ggtcgtccaa gggctctgag atacttttgg agaaacacaa attctgtaac
1741 atcaagtgct acatcgatgg gccttatggg acccccaccc gcaggatctt tgcctctgag
1801 catgccgtgc tcatcggggc aggcatcggc atcaccccct ttgcttccat tctgcagagt
1861 atcatgtaca ggcaccagaa aagaaagcat acttgcccca gctgccagca ctcctggatc
1921 gaaggtgtcc aagacaacat gaagctccat aaggtggact ttatctggat caacagagac
1981 cagcggtctt tcgagtggtt tgtgagcctg ctgactaaac tggagatgga ccaggccgag
2041 gaggctcaat acggccgctt cctggagctg catatgtaca tgacatctgc actgggcaag
2101 aatgacatga aggccattgg cctgcagatg gcccttgacc tcctggccaa caaggagaag
2161 aaagactcca tcacggggct gcagacgcgc acccagcctg ggcggcctga ctggagcaag
2221 gtgttccaga aagtggctgc tgagaagaag ggcaaggtgc aggtcttctt ctgtggctcc
2281 ccagctctgg ccaaggtgct gaagggccat tgtgagaagt tcggcttcag atttttccaa
2341 gagaatttct agcctcacct ctccaagctc tgccccaagt c
//