LOCUS BC125097 2277 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens NADPH oxidase, EF-hand calcium binding domain 5, mRNA
(cDNA clone MGC:149776 IMAGE:40118286), complete cds.
ACCESSION BC125097
VERSION BC125097.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2277)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: l Column: 23.
FEATURES Location/Qualifiers
source 1..2277
/db_xref="H-InvDB:HIT000388550"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149776 IMAGE:40118286"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CTTCACAT sequenced from
the reverse primer"
gene 1..2277
/gene="NOX5"
/gene_synonym="NOX5A"
/gene_synonym="NOX5B"
/db_xref="GeneID:79400"
/db_xref="HGNC:HGNC:14874"
/db_xref="MIM:606572"
CDS 89..2248
/gene="NOX5"
/gene_synonym="NOX5A"
/gene_synonym="NOX5B"
/codon_start=1
/product="NOX5 protein"
/protein_id="AAI25098.1"
/db_xref="GeneID:79400"
/db_xref="HGNC:HGNC:14874"
/db_xref="MIM:606572"
/translation="MSAEEDARWLRWVTQQFKTIAGEDGEISLQEFKAALHVKESFFA
ERFFALFDSDRSGTITLQELQEALTLLIHGSPMDKLKFLFQVYDIDGSGSIDPDELRT
VLQSCLRESAISLPDEKLDQLTLALFESADADGNGAITFEELRDELQRFPGVMENLTI
SAAHWLTAPAPRPRPRRPRQLTRAYWHNHRSQLFCLATYAGLHVLLFGLAASAHRDLG
ASVMVAKGCGQCLNFDCSFIAVLMLRRCLTWLRATWLAQVLPLDQNIQFHQLMGYVVV
GLSLVHTVAHTVNFVLQAQAEASPFQFWELLLTTRPGIGWVHGSASPTGVALLLLLLF
MFICSSSCIRRSGHFEVFYWTHLSYLLVWLLLIFHGPNFWKWLLVPGILFFLEKAIGL
AVSRMAAVCIMEVNLLPSKVTHLLIKRPPFFHYRPGDYLYLNIPTIARYEWHPFTISS
APEQKDTIWLHIRSQGQWTNRLYESFKASDPLGRGSKRLSRSVTMRKSQRSSKGSEIL
LEKHKFCNIKCYIDGPYGTPTRRIFASEHAVLIGAGIGITPFASILQSIMYRHQKRKH
TCPSCQHSWIEGVQDNMKLHKVDFIWINRDQRSFEWFVSLLTKLEMDQAEEAQYGRFL
ELHMYMTSALGKNDMKAIGLQMALDLLANKEKKDSITGLQTRTQPGRPDWSKVFQKVA
AEKKGKVQVFFCGSPALAKVLKGHCEKFGFRFFQENF"
BASE COUNT 458 a 693 c 627 g 499 t
ORIGIN
1 gagtgctacg gacgacgcct atgaagccct tagtccttct agttgcgctt ttgctatggc
61 cttcgtctgt gccggcttat ccgacaccat gagtgccgag gaggatgcca ggtggctccg
121 gtgggtgact cagcagttta agaccattgc aggagaagat ggggagatca gcctgcaaga
181 attcaaagca gctctgcatg tgaaagagtc cttctttgca gagcgattct ttgccctatt
241 tgactccgat agaagtggca ccatcaccct ccaggagctg caggaggcac tgaccctgct
301 catccatggc agccccatgg acaaactcaa attcctcttc caggtgtatg acatcgatgg
361 cagtggctcc attgacccgg atgagctgcg cactgtgctg cagtcgtgtc tgcgcgagag
421 cgccatctcg ctgcctgacg agaagctgga ccagctgacg ctggcgctct tcgaatcggc
481 cgacgcggac ggcaacgggg ccatcacctt cgaggagctc cgggacgagc tgcagcgctt
541 ccccggagtc atggagaacc tgaccatcag cgctgcccac tggctgacgg cccccgcccc
601 ccgcccacgc ccgcgccggc cgcgccagct gacccgcgcc tactggcaca accaccgcag
661 ccagctgttc tgcctggcca cctatgcagg cctccacgtg ctgctcttcg ggctggcggc
721 cagcgcgcac cgggacctcg gcgccagcgt catggtggcc aagggctgtg gccagtgcct
781 caacttcgac tgcagcttca tcgcggtgct gatgctcaga cgctgcctca cctggctgcg
841 ggccacgtgg ctggctcaag tcctaccact ggaccagaac atccagttcc accagcttat
901 gggctacgtg gtagtggggc tgtccctcgt gcacactgtg gctcacactg tgaactttgt
961 actccaggct caggcggagg ccagcccttt ccagttctgg gagctgctgc tcaccacgag
1021 gcctggcatt ggctgggtac acggttcggc ctccccgaca ggtgtcgctc tgctgctgct
1081 gctcctcttc atgttcatct gctccagttc ctgcatccgc aggagtggcc actttgaggt
1141 gttctattgg actcacctgt cctacctcct cgtgtggctt ctgctcatct ttcatgggcc
1201 caacttctgg aagtggctgc tggtgcctgg aatcttgttt ttcctggaga aggccatcgg
1261 actggcagtg tcccgcatgg cagccgtgtg catcatggaa gtcaacctcc tcccctccaa
1321 ggtcactcat ctcctcatca agcggccccc tttttttcac tatagacctg gtgactactt
1381 gtatctgaac atccccacca ttgctcgcta tgagtggcac cccttcacca tcagcagtgc
1441 tcctgagcag aaagacacta tctggctgca cattcggtcc caaggccagt ggacaaacag
1501 gctgtatgag tccttcaagg catcagaccc actgggccgt ggttctaaga ggctgtcgag
1561 gagtgtgaca atgagaaaga gtcaaaggtc gtccaagggc tctgagatac ttttggagaa
1621 acacaaattc tgtaacatca agtgctacat cgatgggcct tatgggaccc ccacccgcag
1681 gatctttgcc tctgagcatg ccgtgctcat cggggcaggc atcggcatca ccccctttgc
1741 ttccattctg cagagtatca tgtacaggca ccagaaaaga aagcatactt gccccagctg
1801 ccagcactcc tggatcgaag gtgtccaaga caacatgaag ctccataagg tggactttat
1861 ctggatcaac agagaccagc ggtctttcga gtggtttgtg agcctgctga ctaaactgga
1921 gatggaccag gccgaggagg ctcaatacgg ccgcttcctg gagctgcata tgtacatgac
1981 atctgcactg ggcaagaatg acatgaaggc cattggcctg cagatggccc ttgacctcct
2041 ggccaacaag gagaagaaag actccatcac ggggctgcag acgcgcaccc agcctgggcg
2101 gcctgactgg agcaaggtgt tccagaaagt ggctgctgag aagaagggca aggtgcaggt
2161 cttcttctgt ggctccccag ctctggccaa ggtgctgaag ggccattgtg agaagttcgg
2221 cttcagattt ttccaagaga atttctagcc tcacctctcc aagctctgcc ccaagtc
//