LOCUS BC125084 2194 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens transcription factor 4, mRNA (cDNA clone MGC:149723 IMAGE:40117795), complete cds. ACCESSION BC125084 VERSION BC125084.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2194) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2194) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 27 Row: j Column: 19. FEATURES Location/Qualifiers source 1..2194 /db_xref="H-InvDB:HIT000388537" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:149723 IMAGE:40117795" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: GACAACA sequenced from the forward primer" gene 1..2194 /gene="TCF4" /gene_synonym="E2-2" /gene_synonym="ITF2" /gene_synonym="SEF2" /gene_synonym="SEF2-1" /gene_synonym="SEF2-1A" /gene_synonym="SEF2-1B" /db_xref="GeneID:6925" /db_xref="HGNC:HGNC:11634" /db_xref="MIM:602272" CDS 27..2042 /gene="TCF4" /gene_synonym="E2-2" /gene_synonym="ITF2" /gene_synonym="SEF2" /gene_synonym="SEF2-1" /gene_synonym="SEF2-1A" /gene_synonym="SEF2-1B" /codon_start=1 /product="TCF4 protein" /protein_id="AAI25085.1" /db_xref="GeneID:6925" /db_xref="HGNC:HGNC:11634" /db_xref="MIM:602272" /translation="MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGH FTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS KTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRP LHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQ DGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSS LPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSP DHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLER LDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLSANRHSLM VGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSS GSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTPEQKAERE KERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQ VRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHMGQM" BASE COUNT 592 a 590 c 527 g 485 t ORIGIN 1 cgggcggttt gtgtgatttt gctaaaatgc atcaccaaca gcgaatggct gccttaggga 61 cggacaaaga gctgagtgat ttactggatt tcagtgcgat gttttcacct cctgtgagca 121 gtgggaaaaa tggaccaact tctttggcaa gtggacattt tactggctca aatgtagaag 181 acagaagtag ctcagggtcc tgggggaatg gaggacatcc aagcccgtcc aggaactatg 241 gagatgggac tccctatgac cacatgacca gcagggacct tgggtcacat gacaatctct 301 ctccaccttt tgtcaattcc agaatacaaa gtaaaacaga aaggggctca tactcatctt 361 atgggagaga atcaaactta cagggttgcc accagcagag tctccttgga ggtgacatgg 421 atatgggcaa cccaggaacc ctttcgccca ccaaacctgg ttcccagtac tatcagtatt 481 ctagcaataa tccccgaagg aggcctcttc acagtagtgc catggaggta cagacaaaga 541 aagttcgaaa agttcctcca ggtttgccat cttcagtcta tgctccatca gcaagcactg 601 ccgactacaa tagggactcg ccaggctatc cttcctccaa accagcaacc agcactttcc 661 ctagctcctt cttcatgcaa gatggccatc acagcagtga cccttggagc tcctccagtg 721 ggatgaatca gcctggctat gcaggaatgt tgggcaactc ttctcatatt ccacagtcca 781 gcagctactg tagcctgcat ccacatgaac gtttgagcta tccatcacac tcctcagcag 841 acatcaattc cagtcttcct ccgatgtcca ctttccatcg tagtggtaca aaccattaca 901 gcacctcttc ctgtacgcct cctgccaacg ggacagacag tataatggca aatagaggaa 961 gcggggcagc cggcagctcc cagactggag atgctctggg gaaagcactt gcttcgatct 1021 attctccaga tcacactaac aacagctttt catcaaaccc ttcaactcct gttggctctc 1081 ctccatctct ctcagcaggc acagctgttt ggtctagaaa tggaggacag gcctcatcgt 1141 ctcctaatta tgaaggaccc ttacactctt tgcaaagccg aattgaagat cgtttagaaa 1201 gactggatga tgctattcat gttctccgga accatgcagt gggcccatcc acagctatgc 1261 ctggtggtca tggggacatg catggaatca ttggaccttc tcataatgga gccatgggtg 1321 gtctgggctc agggtatgga accggccttc tttcagccaa cagacattca ctcatggtgg 1381 ggacccatcg tgaagatggc gtggccctga gaggcagcca ttctcttctg ccaaaccagg 1441 ttccggttcc acagcttcct gtccagtctg cgacttcccc tgacctgaac ccaccccagg 1501 acccttacag aggcatgcca ccaggactac aggggcagag tgtctcctct ggcagctctg 1561 agatcaaatc cgatgacgag ggtgatgaga acctgcaaga cacgaaatct tcggaggaca 1621 agaaattaga tgacgacaag aaggatatca aatcaattac taggtcaaga tctagcaata 1681 atgacgatga ggacctgaca ccagagcaga aggcagagcg tgagaaggag cggaggatgg 1741 ccaacaatgc ccgagagcgt ctgcgggtcc gtgacatcaa cgaggctttc aaagagctcg 1801 gccgcatggt gcagctccac ctcaagagtg acaagcccca gaccaagctc ctgatcctcc 1861 accaggcggt ggccgtcatc ctcagtctgg agcagcaagt ccgagaaagg aatctgaatc 1921 cgaaagctgc gtgtctgaaa agaagggagg aagagaaggt gtcctcggag cctccccctc 1981 tctccttggc cggcccacac cctggaatgg gagacgcatc gaatcacatg ggacagatgt 2041 aaaagggtcc aagttgccac attgcttcat taaaacaaga gaccacttcc ttaacagctg 2101 tattatctta aacccacata aacacttctc cttaaccccc atttttgtaa tataagacaa 2161 gtctgagtag ttatgaatcg cagacgcaag aggg //