LOCUS BC125061 1781 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens aryl hydrocarbon receptor nuclear translocator-like 2,
mRNA (cDNA clone MGC:149671 IMAGE:40117267), complete cds.
ACCESSION BC125061
VERSION BC125061.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: h Column: 15.
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000388514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149671 IMAGE:40117267"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGTATCTT sequenced from the forward primer"
gene 1..1781
/gene="ARNTL2"
/gene_synonym="BMAL2"
/gene_synonym="CLIF"
/gene_synonym="MOP9"
/gene_synonym="PASD9"
/db_xref="GeneID:56938"
/db_xref="HGNC:HGNC:18984"
CDS 14..1780
/gene="ARNTL2"
/gene_synonym="BMAL2"
/gene_synonym="CLIF"
/gene_synonym="MOP9"
/gene_synonym="PASD9"
/codon_start=1
/product="ARNTL2 protein"
/protein_id="AAI25062.1"
/db_xref="GeneID:56938"
/db_xref="HGNC:HGNC:18984"
/translation="MAAEEEAAAGGKVLREENQCIAPVVSSRVSPGTRPTAMGSFSSH
MTEFPRKRKGSDSDPSQEAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVL
RMAVQHLRSLKGLTNSYVGSNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVS
KSVSKILNYDQASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSN
LHAGRTRVYSGSRRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYLRSWP
PNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKFV
YVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAK
DGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVLGHSEPGEASFLPCSSQSSEESSRQS
CMSVPGMSTGTVLGAGSIGTDIANEILDLQRLQSSSYLDDSSPTGLMKDTHTVNCRSM
SNKELFPPSPSEMGELEATRQNQSTVAVHSHEPLLSDGAQLDFDALCDNDDTAMAAFM
NYLEAEGGLGDPGDFSDIQWTL"
BASE COUNT 563 a 338 c 403 g 477 t
ORIGIN
1 agtggctcct gcgatggcgg cggaagagga ggctgcggcg ggaggtaaag tgttgagaga
61 ggagaaccag tgcattgctc ctgtggtttc cagccgcgtg agtccaggga caagaccaac
121 agctatgggg tctttcagct cacacatgac agagtttcca cgaaaacgca aaggaagtga
181 ttcagaccca tcccaagaag ctcatagcca aactgaaaag cggaggagag ataaaatgaa
241 taacctgatt gaagaactgt ctgcaatgat ccctcagtgc aaccccatgg cgcgtaaact
301 ggacaaactt acagttttaa gaatggctgt tcaacacttg agatctttaa aaggcttgac
361 aaattcttat gtgggaagta attatagacc atcatttctt caggataatg agctcagaca
421 tttaatcctt aagactgcag aaggcttctt atttgtggtt ggatgtgaaa gaggaaaaat
481 tctcttcgtt tctaagtcag tctccaaaat acttaattat gatcaggcta gtttgactgg
541 acaaagctta tttgacttct tacatccaaa agatgttgcc aaagtaaagg aacaactttc
601 ttcttttgat atttcaccaa gagaaaagct aatagatgcc aaaactggtt tgcaagttca
661 cagtaatctc cacgctggaa ggacacgtgt gtattctggc tcaagacgat cttttttctg
721 tcggataaag agttgtaaaa tctctgtcaa agaagagcat ggatgcttac ccaactcaaa
781 gaagaaagag cacagaaaat tctatactat ccattgcact ggttacttga gaagctggcc
841 tccaaatatt gttggaatgg aagaagaaag gaacagtaag aaagacaaca gtaattttac
901 ctgccttgtg gccattggaa gattacagcc atatattgtt ccacagaaca gtggagagat
961 taatgtgaaa ccaactgaat ttataacccg gtttgcagtg aatggaaaat ttgtctatgt
1021 agatcaaagg gcaacagcga ttttaggata tctgcctcag gaacttttgg gaacttcttg
1081 ttatgaatat tttcatcaag atgaccacaa taatttgact gacaagcaca aagcagttct
1141 acagagtaag gagaaaatac ttacagattc ctacaaattc agagcaaaag atggctcttt
1201 tgtaacttta aaaagccaat ggtttagttt cacaaatcct tggacaaaag aactggaata
1261 tattgtatct gtcaacactt tagttttggg acatagtgag cctggagaag catcattttt
1321 accttgtagc tctcaatcat cagaagaatc ctctagacag tcctgtatga gtgtacctgg
1381 aatgtctact ggaacagtac ttggtgctgg tagtattgga acagatattg caaatgaaat
1441 tctggattta cagaggttac agtcttcttc ataccttgat gattcgagtc caacaggttt
1501 aatgaaagat actcatactg taaactgcag gagtatgtca aataaggagt tgtttccacc
1561 aagtccttct gaaatggggg agctagaggc taccaggcaa aaccagagta ctgttgctgt
1621 ccacagccat gagccactcc tcagtgatgg tgcacagttg gatttcgatg ccctatgtga
1681 caatgatgac acagccatgg ctgcatttat gaattactta gaagcagagg ggggcctggg
1741 agaccctggg gacttcagtg acatccagtg gaccctctag c
//