LOCUS BC125046 1363 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens G protein-coupled receptor 39, mRNA (cDNA clone
MGC:149541 IMAGE:40116106), complete cds.
ACCESSION BC125046
VERSION BC125046.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1363)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1363)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: c Column: 11.
FEATURES Location/Qualifiers
source 1..1363
/db_xref="H-InvDB:HIT000388499"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149541 IMAGE:40116106"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AGTTTTA sequenced from
the reverse primer"
gene 1..1363
/gene="GPR39"
/db_xref="GeneID:2863"
/db_xref="HGNC:HGNC:4496"
/db_xref="MIM:602886"
CDS 1..1362
/gene="GPR39"
/codon_start=1
/product="GPR39 protein"
/protein_id="AAI25047.1"
/db_xref="GeneID:2863"
/db_xref="HGNC:HGNC:4496"
/db_xref="MIM:602886"
/translation="MASPSLPGSDCSQIIDHSHVPEFEVATWIKITLILVYLIIFVMG
LLGNSATIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYSIIWNPLTTS
SYTLSCKLHTFLFEACSYATLLHVLTLSFERYIAICHPFRYKAVSGPCQVKLLIGFVW
VTSALVALPLLFAMGTEYPLVNVPSHRGLTCNRSSTRHHEQPETSNMSICTNLSSRWT
VFQSSIFGAFVVYLVVLLSVAFMCWNMMQVLMKSQKGSLAGGTRPPQLRKSESEESRT
ARRQTIIFLRLIVVTLAVCWMPNQIRRIMAAAKPKHDWTRSYFRAYMILLPFSETFFY
LSSVINPLLYTVSSQQFRRVFVQVLCCRLSLQHANHEKRLRVHAHSTTDSARFVQRPL
LFASRRQSSARRTEKIFLSTFQSEAEPQSKSQSLSLESLEPNSGAKPANSAAENGFQE
HEV"
BASE COUNT 264 a 435 c 362 g 302 t
ORIGIN
1 atggcttcac ccagcctccc gggcagtgac tgctcccaaa tcattgatca cagtcatgtc
61 cccgagtttg aggtggccac ctggatcaaa atcaccctta ttctggtgta cctgatcatc
121 ttcgtgatgg gccttctggg gaacagcgcc accattcggg tcacccaggt gctgcagaag
181 aaaggatact tgcagaagga ggtgacagac cacatggtga gtttggcttg ctcggacatc
241 ttggtgttcc tcatcggcat gcccatggag ttctacagca tcatctggaa tcccctgacc
301 acgtccagct acaccctgtc ctgcaagctg cacactttcc tcttcgaggc ctgcagctac
361 gctacgctgc tgcacgtgct gacactcagc tttgagcgct acatcgccat ctgtcacccc
421 ttcaggtaca aggctgtgtc gggaccttgc caggtgaagc tgctgattgg cttcgtctgg
481 gtcacctccg ccctggtggc actgcccttg ctgtttgcca tgggtactga gtaccccctg
541 gtgaacgtgc ccagccaccg gggtctcact tgcaaccgct ccagcacccg ccaccacgag
601 cagcccgaga cctccaatat gtccatctgt accaacctct ccagccgctg gaccgtgttc
661 cagtccagca tcttcggcgc cttcgtggtc tacctcgtgg tcctgctctc cgtagccttc
721 atgtgctgga acatgatgca ggtgctcatg aaaagccaga agggctcgct ggccgggggc
781 acgcggcctc cgcagctgag gaagtccgag agcgaagaga gcaggaccgc caggaggcag
841 accatcatct tcctgaggct gattgttgtg acattggccg tatgctggat gcccaaccag
901 attcggagga tcatggctgc ggccaaaccc aagcacgact ggacgaggtc ctacttccgg
961 gcgtacatga tcctcctccc cttctcggag acgtttttct acctcagctc ggtcatcaac
1021 ccgctcctgt acacggtgtc ctcgcagcag tttcggcggg tgttcgtgca ggtgctgtgc
1081 tgccgcctgt cgctgcagca cgccaaccac gagaagcgcc tgcgcgtaca tgcgcactcc
1141 accaccgaca gcgcccgctt tgtgcagcgc ccgttgctct tcgcgtcccg gcgccagtcc
1201 tctgcaagga gaactgagaa gattttctta agcacttttc agagcgaggc cgagccccag
1261 tctaagtccc agtcattgag tctcgagtca ctagagccca actcaggcgc gaaaccagcc
1321 aattctgctg cagagaatgg ttttcaggag catgaagttt gaa
//