LOCUS BC125020 6307 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens trichorhinophalangeal syndrome I, mRNA (cDNA clone
MGC:134928 IMAGE:40073132), complete cds.
ACCESSION BC125020
VERSION BC125020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 18 Row: l Column: 9.
FEATURES Location/Qualifiers
source 1..6307
/db_xref="H-InvDB:HIT000388487_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:134928 IMAGE:40073132"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..6307
/gene="TRPS1"
/gene_synonym="GC79"
/db_xref="GeneID:7227"
/db_xref="HGNC:HGNC:12340"
/db_xref="MIM:604386"
CDS 475..3036
/gene="TRPS1"
/gene_synonym="GC79"
/codon_start=1
/product="TRPS1 protein"
/protein_id="AAI25021.1"
/db_xref="GeneID:7227"
/db_xref="HGNC:HGNC:12340"
/db_xref="MIM:604386"
/translation="MVRKKNPPLRNVASEGEGQILEPIGTESKVSGKNKEFSADQMSE
NTDQSDAAELNHKEEHSLHVQDPSSSSKKDLKSAVLSEKAGFNYESPSKGGNFPSFPH
DEVTDRNMLAFSSPAAGGVCEPLKSPQRAEADDPQDMACTPSGDSLETKEDQKMSPKA
TEETGQAQSGQANCQGLSPVSVASKNPQVPSDGGVRLNKSKTDLLVNDNPDPAPLSPE
LQDFKCNICGYGYYGNDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHS
KDFQKVNRSVFSGVLQDINSSRPVLLNGTYDVQVTSGGTFIGIGRKTPDCQGNTKYFR
CKFCNFTYMGNSSTELEQHFLQTHPNKIKASLPSSEVAKPSEKNSNKSIPALQSSDSG
DLGKWQDKITVKAGDDTPVGYSVPIKPLDSSRQNGTEATSYYWCKFCSFSCESSSSLK
LLEHYGKQHGAVQSGGLNPELNDKLSRGSVINQNDLAKSSEGETMTKTDKSSSGAKKK
DFSSKGAEDNMVTSYNCQFCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPF
CPRGLCSPEKHLGEITYPFACRKSNCSHCALLLLHLSPGAAGSSRVKHQCHQCSFTTP
DVDVLLFHYESVHESQASDVKQEANHLQGSDGQQSVKESKEHSCTKCDFITQVEEEIS
RHYRRAHSCYKCRQCSFTAADTQSLLEHFNTVHCQEQDITTANGEEDGHAISTIKEEP
KIDFRVYNLLTPDSKMGEPVSESVVKREKLEEKDGLKEKVWTESSSDDLRNVTWRGAD
ILRGSPSYTQASLGLLTPVSGTQEQTKTLRDSPNVEAAHLARPIYGLAVETKGFL"
BASE COUNT 1922 a 1368 c 1354 g 1663 t
ORIGIN
1 tttctccaga cctcgcgtcc tctcgattgc tctctcgcct tcctatttct tttttttttt
61 tttaaacaaa aaacaacacc ccctcccctc tcccacccgg caccgggcac atccttgctc
121 tatttccttt ctctttctct ctctctctct ctctttttta ataagggtgg gggagggaaa
181 ggggggggag gcaggaaaga cctttttctc tcccccccgc aataatccaa gatcaactct
241 gcaaacaaca gaagacggtt catggctttg gccgccgcgc caccatcttt cgggctgccg
301 agggtgttct tgacgattaa tcaacagatg tacagatcag ctctcaaaat gtcttctgtg
361 tcttctgagc atcttctaag acaattgcat tagcctcctg ctagttgact aatagaatta
421 ataattgtaa aaagcactct taaagccaca tgccttatga agtcaatgct ggatatggtc
481 cggaaaaaga acccccctct gagaaacgtt gcaagtgaag gcgagggcca gatcctggag
541 cctataggta cagaaagcaa ggtatctgga aagaacaaag aattttctgc agatcagatg
601 tcagaaaata cggatcagag tgatgctgca gaactaaatc ataaggagga acatagcttg
661 catgttcaag atccatcttc tagcagtaag aaggacttga aaagcgcagt tctgagtgag
721 aaggctggct tcaattatga aagccccagt aagggaggaa actttccctc ctttccgcat
781 gatgaggtga cagacagaaa tatgttggct ttctcatctc cagctgctgg gggagtctgt
841 gagcccttga agtctccgca aagagcagag gcagatgacc ctcaagatat ggcctgcacc
901 ccctcagggg actcactgga gacaaaggaa gatcagaaga tgtcaccaaa ggctacagag
961 gaaacagggc aagcacagag tggtcaagcc aattgtcaag gtttgagccc agtttcagtg
1021 gcctcaaaaa acccacaagt gccttcagat gggggtgtaa gactgaataa atccaaaact
1081 gacttactgg tgaatgacaa cccagacccg gcacctctgt ctccagagct tcaggacttt
1141 aaatgcaata tctgtggata tggttactac ggcaacgacc ccacagatct gattaagcac
1201 ttccgaaagt atcacttagg actgcataac cgcaccaggc aagatgctga gctggacagc
1261 aaaatcttgg cccttcataa catggtgcag ttcagccatt ccaaagactt ccagaaggtc
1321 aaccgttctg tgttttctgg tgtgctgcag gacatcaatt cttcaaggcc tgttttacta
1381 aatgggacct acgatgtgca ggtgacttca ggtggaacat tcattggcat tggacggaaa
1441 acaccagatt gccaagggaa caccaagtat ttccgctgta aattctgcaa tttcacttat
1501 atgggcaatt catccaccga attagaacaa cattttcttc agactcaccc aaacaaaata
1561 aaagcttctc tcccctcctc tgaggttgca aaaccttcag agaaaaactc taacaagtcc
1621 atccctgcac ttcaatccag tgattctgga gacttgggaa aatggcagga caagataaca
1681 gtcaaagcag gagatgacac tcctgttggg tactcagtgc ccataaagcc cctcgattcc
1741 tctagacaaa atggtacaga ggccaccagt tactactggt gtaaattttg tagtttcagc
1801 tgtgagtcat ctagctcact taaactgcta gaacattatg gcaagcagca cggagcagtg
1861 cagtcaggcg gccttaatcc agagttaaat gataagcttt ccaggggctc tgtcattaat
1921 cagaatgatc tagccaaaag ttcagaagga gagacaatga ccaagacaga caagagctcg
1981 agtggggcta aaaagaagga cttctccagc aagggagccg aggataatat ggtaacgagc
2041 tataattgtc agttctgtga cttccgatat tccaaaagcc atggccctga tgtaattgta
2101 gtggggccac ttctccgtca ttatcaacag ctccataaca ttcacaagtg taccattaaa
2161 cactgtccat tctgtcccag aggactttgc agcccagaaa agcaccttgg agaaattact
2221 tatccgtttg cttgtagaaa aagtaattgt tcccactgtg cactcttgct tctgcacttg
2281 tctcctgggg cggctggaag ctcgcgagtc aaacatcagt gccatcagtg ttcattcacc
2341 acccctgacg tagatgtact cctctttcac tatgaaagtg tgcatgagtc ccaagcatcg
2401 gatgtcaaac aagaagcaaa tcacctgcaa ggatcggatg ggcagcagtc tgtcaaggaa
2461 agcaaagaac actcatgtac caaatgtgat tttattaccc aagtggaaga agagatttcc
2521 cgacactaca ggagagcaca cagctgctac aaatgccgtc agtgcagttt tacagctgcc
2581 gatactcagt cactactgga gcacttcaac actgttcact gccaggaaca ggacatcact
2641 acagccaacg gcgaagagga cggtcatgcc atatccacca tcaaagagga gcccaaaatt
2701 gacttcaggg tctacaatct gctaactcca gactctaaaa tgggagagcc agtttctgag
2761 agtgtggtga agagagagaa gctggaagag aaggacgggc tcaaagagaa agtttggacc
2821 gagagttcca gtgatgacct tcgcaatgtg acttggagag gggcagacat cctgcggggg
2881 agtccgtcat acacccaagc aagcctgggg ctgctgacgc ctgtgtctgg cacccaagag
2941 cagacaaaga ctctaaggga tagtcccaat gtggaggccg cccatctggc gcgacctatt
3001 tatggcttgg ctgtggaaac caagggattc ctgtaggggg cgccagctgg cggagagaag
3061 tctggggccc tcccccagca gtatcctgca tcgggagaaa acaagtccaa ggatgaatcc
3121 cagtccctgt tacggaggcg tagaggctcc ggtgtttttt gtgccaattg cctgaccaca
3181 aagacctctc tctggcgaaa gaatgcaaat ggcggatatg tatgcaacgc gtgtggcctc
3241 taccagaagc ttcactcgac tcccaggcct ttaaacatca ttaaacaaaa caacggtgag
3301 cagattatta ggaggagaac aagaaagcgc cttaacccag aggcacttca ggctgagcag
3361 ctcaacaaac agcagagggg cagcaatgag gagcaagtca atggaagccc gttagagagg
3421 aggtcagaag atcatctaac tgaaagtcac cagagagaaa ttccactccc cagcctaagt
3481 aaatacgaag cccagggttc attgactaaa agccattctg ctcagcagcc agtcctggtc
3541 agccaaactc tggatattca caaaaggatg caacctttgc acattcagat aaaaagtcct
3601 caggaaagta ctggagatcc aggaaatagt tcatccgtat ctgaagggaa aggaagttct
3661 gagagaggca gtcctataga aaagtacatg agacctgcga aacacccaaa ttattcacca
3721 ccaggcagcc ctattgaaaa gtaccagtac ccactttttg gacttccctt tgtacataat
3781 gacttccaga gtgaagctga ttggctgcgg ttctggagta aatataagct ctccgttcct
3841 gggaatccgc actacttgag tcacgtgcct ggcctaccaa atccttgcca aaactatgtg
3901 ccttatccca ccttcaatct gcctcctcat ttttcagctg ttggatcaga caatgacatt
3961 cctctagatt tggcgatcaa gcattccaga cctgggccaa ctgcaaacgg tgcctccaag
4021 gagaaaacga aggcaccacc aaatgtaaaa aatgaaggtc ccttgaatgt agtaaaaaca
4081 gagaaagttg atagaagtac tcaagatgaa ctttcaacaa aatgtgtgca ctgtggcatt
4141 gtctttctgg atgaagtgat gtatgctttg catatgagtt gccatggtga cagtggacct
4201 ttccagtgca gcatatgcca gcatctttgc acggacaaat atgacttcac aacacatatc
4261 cagaggggcc tgcataggaa caatgcacaa gtggaaaaaa atggaaaacc taaagagtaa
4321 aaccttagca cttagcacaa ttaaatagaa ataggttttc ttgatgggaa ttcaatagct
4381 tgtaatgtct tatgaagacc tattaaaaaa atacttcata gagcctgcct tatccaacat
4441 gaaattccct tcttttgtta ttctttcttt tgatgagtag gttaccaaga ttaaaaagtg
4501 agataaatgg tcaatgagaa agaatggaag atggtaaaca atcacttttt aaaacctgtt
4561 aagtcaaaac catcttggct aatatgtact ggggaaataa tccataagag atatcaccag
4621 actagaatta atatatttat aaagaaagag accaaaactg tctagaattt gaaagggttt
4681 acatattatt atactaaagc agtactggac cggccattgg accatttgtt ccaaaaccca
4741 taaattgttg cctaaattta taatgatcat gaaaccctag gcagaggagg agaaattgaa
4801 ggtccagggc aatgaaagaa aaatggcgcc ctctcaattt agtcttctct cattggccat
4861 gtttcagatt ttgacctaga aatgcgagct gtggttaggc ttggttagag tgcagcaagc
4921 aacatgacag atggtggcac gctgttttta cccagccctg cctgtacata cacatgcaca
4981 ccctctctga tatttttgtc ctttagatgt tcaaatactc agtagtcctt ttgtttgcgg
5041 tttagattca ttttgtccac acatgtaccc attttaaaaa acaatgtcct cgatgcttct
5101 gtagtgattt cattttagcc aggtatttct ttcttgtgtg tgatgaacca gtatggattt
5161 gcttttctaa gcctcctgtt ggttactaat ctcacttggc acattataac taaaggaatc
5221 ccctcaattc aaaagcatag atggatacaa atgtcagacc gtgggtttaa tttgtttaga
5281 acacatggca tttcttcaca aggtaacctg ctgtatttat ttattttctt ttggttaaat
5341 ataatttcca aactttgtgg tcaggcagcg tctaaggtta cgttaccaca gactgacagt
5401 tggtatatgt accagccaat cccttcatta aatgtataca gatttagtta agtagcatta
5461 aataggattc ttagaagtat gtcctcatag aacttttaat acttaaggct ttgtaaaaac
5521 tatccatgaa gggaaagctc ctcagcataa ctgctcaggg aaatagggct aaataactga
5581 acattaaata attggttaaa ggtgctgtta gtcgagcctc aatgcttgct acaaggatgt
5641 atgtacaagg actgacttta ataatttgca ttatattgtc ccaaccagta gtttattttt
5701 tgccacggag atgtagaaga tattacaagc tactggatgc actgtcagat taacttattt
5761 cattaaagaa gttgggagaa caaataggaa aaaaaaaact tatttttcta gtaaatatta
5821 atgtattaca tttcaaataa tggtgcctga catattgaat aattattttc tacagtgtac
5881 gtatgcaaca aagatattcc atcatgcatt agagtcagtt ctggctctgc ctagctgttt
5941 acatttgcaa atgtagcaaa caaggtaatg aagcaactat ttctattgca gtagatatcc
6001 ttttgtgtgt gtgtgtgtgc attaaagttg taaacggtaa catgaaacaa atgaaagttc
6061 ttgctataat ggtatggaaa acaagaagga aatgaaaata tttttatgcc tacttaggaa
6121 aaaaagggta gcacttattc attccaagta cttttttttt tttaattttt aagctcttaa
6181 ctcacattgt tatgcttaag atgataaaca tatatcctct ttttattgct ttgtctatgt
6241 ttcatatgaa acatttcaga aattattttg ataagtgttg ctggaatctg caacgctgat
6301 attatca
//