LOCUS BC122529 2994 bp mRNA linear HUM 21-AUG-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 194, mRNA (cDNA clone
MGC:141683 IMAGE:40012183), complete cds.
ACCESSION BC122529
VERSION BC122529.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2994)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2994)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: b Column: 22.
FEATURES Location/Qualifiers
source 1..2994
/db_xref="H-InvDB:HIT000388424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141683 IMAGE:40012183"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TATTAGCA"
gene 1..2994
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/db_xref="GeneID:25943"
/db_xref="HGNC:HGNC:17721"
CDS 107..2857
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/codon_start=1
/product="C20orf194 protein"
/protein_id="AAI22530.1"
/db_xref="GeneID:25943"
/db_xref="HGNC:HGNC:17721"
/translation="MEGCLGQELFSNHMFLTSLSSPNRQPFVLFGNHSTRENLNAGNF
NFPSEGHLVRSTGPGGSFAKHMVAQCVSPKGPLACSRTYFFGATHVPYLGGDSKLPKK
TEQIRLLSQIYAAVIEAVLAGIACYAKTSSLTKAKEVAEQTLGSGLDSFELIPFKAAL
RSKMTFHIHAVNNQGRIVPLDSEDSLSFVKTACMAVYDIPDLLGGNGCLGSVVFSESF
LTSQILVKEKDGTVTTETSSVVLTAAVPRFCSWLVEDNEVKLSEKTQQAVRGDESFLG
TYLTGGEGAYLYSSNLQSWPEEGNVHFFSSGLLFSHCRHGSIIISKDHMNSISFYDGD
STSTVAALLIDFKSSLLPHLPVHFHGSSNFLMIALFPKSKIYQAFYSEVFSLWKQQDN
SGISLKVIQEDGLSVEQKRLHSSAQKLFSALSQPAGEKRSSLKLLSAKLPELDWFLQH
FAISSISQEPVMRTHLPVLLQQAEINTTHRIESDKVIISIVTGLPGCHASELCAFLVT
LHKECGRWMVYRQIMDSSECFHAAHFQRYLSSALEAQQNRSARQSAYIRKKTRLLVVL
QGYTDVIDVVQALQTHPDSNVKASFTIGAITACVEPMSCYMEHRFLFPKCLDQCSQGL
VSNVVFTSHTTEQRHPLLVQLQSLIRAANPAAAFILAENGIVTRNEDIELILSENSFS
SPEMLRSRYLMYPGWYEGKLNAGSVYPLMVQICVWFGRPLEKTRFVAKCKAIQSSIKP
SPFSGNIYHILGKVKFSDSERTMEVCYNTLANSLSIMPVLEGPTPPPDSKSVSQDSSG
QQECYLVFIGCSLKEDSIKDWLRQSAKQKPQRKALKTRGMLTQQEIRSIHVKRHLEPL
PAGYFYNGTQFVNFFGDKTDFHPLMDQFMNDYVEEANREIEKYNQELEQQEYHDLFEL
KP"
BASE COUNT 754 a 751 c 709 g 780 t
ORIGIN
1 ggcatccgtt tccaaccagc caaggatatt cggtcgactg tactggctga ccactttgct
61 caggccgcaa gtgtccctca gaaaagcctg aggacttatt aaggtcatgg aaggttgcct
121 tggccaggaa ctcttttcta atcacatgtt tttgacttcc ctctctagcc ctaaccggca
181 gccatttgtt ctctttggta atcactccac acgagaaaac ctgaatgctg gcaactttaa
241 cttcccttct gaaggacatc tggtacgaag cactggtccc ggcgggagct ttgccaagca
301 catggtagcc cagtgtgtct caccaaaggg acctcttgct tgttcgagaa catacttttt
361 tggagctact catgttcctt acttgggtgg tgacagcaag ctgcccaaga aaactgaaca
421 aattaggcta ttgtcccaga tatatgctgc tgttattgag gctgttttgg ctggcattgc
481 atgttatgct aaaacttcca gtctaacaaa ggccaaggag gtagcagagc aaactctggg
541 atctgggtta gattcctttg agttgattcc gtttaaggca gccctgcgct ccaagatgac
601 ttttcatata catgctgtga ataatcaggg aagaattgta ccgctggaca gtgaagatag
661 cttatccttt gtgaagacgg cttgtatggc cgtctatgac attcctgact tactgggagg
721 caatggttgt ttaggatctg tggttttctc tgaatcattt ttgacttctc agatcttagt
781 taaagaaaag gatggcactg ttaccacaga aaccagctcc gtagtcctga ctgctgctgt
841 acccagattc tgctcctggc tggtggaaga taatgaagta aaattgtctg agaaaaccca
901 gcaagcagtg aggggggatg agtctttcct gggcacttat ctaacaggag gagaaggagc
961 atatctttat tccagcaatc tacagtcctg gcctgaggaa gggaatgttc atttcttctc
1021 tagtggcctt ctgttttctc actgtcgtca tggaagtatc atcatttcca aggatcacat
1081 gaattccatt tccttctatg atggggattc caccagtact gttgctgctc ttctcataga
1141 cttcaaaagc tcattgcttc ctcacctccc agttcatttc catggatcaa gcaattttct
1201 gatgattgcc cttttcccca aatcgaagat ataccaagca ttttactcag aggtcttctc
1261 cctctggaaa cagcaggata actcagggat ctctttaaaa gtgatccagg aagatggatt
1321 atctgtggaa caaaagagat tgcactccag tgcacagaag ctcttcagtg ccctgagcca
1381 gcctgctggg gagaaacgga gttccctaaa gttactctca gccaaactcc cagagctgga
1441 ctggtttctc cagcatttcg ccatcagcag cattagccag gagcctgtga tgcggaccca
1501 tcttcctgtg ctgctgcagc aagctgaaat caacactact cacagaatag aaagtgacaa
1561 ggtaattatc agcattgtaa ccggcctccc aggctgtcac gctagcgagc tctgtgcttt
1621 tctggtcact ctgcataagg aatgtggcag atggatggtg tatcgccaaa tcatggacag
1681 ctctgaatgt tttcatgctg cacacttcca gagatacctt tccagtgccc tagaggccca
1741 gcagaaccgc tctgcgcgcc agtcagccta catccgcaag aagaccagac tgctggtggt
1801 gttacaaggc tacacagatg ttattgatgt tgtccaggcc ctgcagaccc acccagactc
1861 aaatgtcaag gcctccttca ccattggtgc catcacagca tgtgtggagc ccatgagctg
1921 ctacatggag cacagatttc tctttcctaa atgtcttgac cagtgttcac aaggcctggt
1981 gagtaacgtg gtattcacca gtcacaccac ggagcagcgg caccctctcc ttgttcagct
2041 gcagagcctc atcagggctg ccaatcctgc tgcagccttc attcttgcag aaaatgggat
2101 tgtcaccagg aatgaagaca ttgagctgat tctctcagaa aacagttttt caagtcctga
2161 gatgctacga tctcgatatt taatgtatcc tggctggtat gaaggtaaat tgaatgctgg
2221 atcagtctat cccctaatgg ttcagatctg cgtatggttt ggccgtccct tggagaagac
2281 tcgctttgtg gccaaatgta aagcaattca gtcctccatc aagccaagtc ccttctccgg
2341 aaacatctac cacatcctgg gcaaagtgaa gttttcagac tctgagagga ccatggaggt
2401 ctgctacaac acactggcca actccttgag catcatgcca gttttggaag gacccacacc
2461 accaccagac tccaaaagcg tatctcaaga cagcagcggg cagcaggagt gctaccttgt
2521 gttcatcggc tgctccctga aggaagacag catcaaggac tggctgcggc agtcagctaa
2581 gcagaagcct cagaggaaag ccctgaagac cagggggatg ctgacgcaac aggagatcag
2641 gagcatccac gtaaaacgcc acttggaacc cctacctgca ggctactttt ataatggcac
2701 ccaatttgtt aacttctttg gtgacaaaac tgattttcac ccactcatgg accagttcat
2761 gaatgactac gtggaagaag ccaaccggga aattgagaag tataaccagg agctggaaca
2821 gcaggagtat catgacctct ttgagctgaa gccctagagg aaggctgggc ccgtacgtcc
2881 tgcagaatgt ccaccttgga gatggacgaa cgggtgtctt aacctcagct ctgctggagg
2941 cctctccctt aaggggctgt ctttgttctc cttggcctgt gtgggctggc ttga
//