LOCUS BC121821 1042 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens transient receptor potential cation channel, subfamily
M, member 3, mRNA (cDNA clone IMAGE:40109237), complete cds.
ACCESSION BC121821
VERSION BC121821.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: m Column: 20
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1042
/db_xref="H-InvDB:HIT000388414"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40109237"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert"
gene 1..1042
/gene="TRPM3"
/gene_synonym="GON-2"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/db_xref="GeneID:80036"
/db_xref="HGNC:HGNC:17992"
/db_xref="MIM:608961"
CDS 202..894
/gene="TRPM3"
/gene_synonym="GON-2"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/codon_start=1
/product="transient receptor potential cation channel,
subfamily M, member 3"
/protein_id="AAI21822.2"
/db_xref="GeneID:80036"
/db_xref="HGNC:HGNC:17992"
/db_xref="MIM:608961"
/translation="MYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQP
KLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWG
IVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQL
EKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDI
LAFGHKYSEEGG"
BASE COUNT 290 a 244 c 262 g 246 t
ORIGIN
1 tgttgctgtg ggcgtctgat aggccagcat gttggcctca cccccagtat ctccgtgctt
61 cagaatgaga aaaatgaaag tcgcctctcc cgaaatgaca tccagtctga aaagtggtcc
121 atcagcaaac acactcaact cagccctacg gatgcttttg ggaccattga gttccaagga
181 ggtggccatt ccaacaaagc catgtatgtg cgagtatctt ttgatacaaa acctgatctc
241 ctcttacacc tgatgaccaa ggaatggcag ttggagcttc ccaagcttct catctctgtc
301 catgggggcc tgcagaactt tgaactccag ccaaaactca agcaagtctt tgggaaaggg
361 ctcatcaaag cagctatgac aactggagcg tggatattca ctggaggggt taacacaggt
421 gttattcgtc atgttggcga tgccttgaag gatcatgcct ctaagtctcg aggaaagata
481 tgcaccatag gtattgcccc ctggggaatt gtggaaaacc aggaggacct cattggaaga
541 gatgttgtcc ggccatacca gaccatgtcc aatcccatga gcaagctcac tgttctcaac
601 agcatgcatt cccacttcat tctggctgac aacgggacca ctggaaaata tggagcagag
661 gtgaaacttc gaagacaact ggaaaagcat atttcactcc agaagataaa cacaagaatc
721 ggtcaaggtg ttcctgtggt ggcactcata gtggaaggag gacccaatgt gatctcgatt
781 gttttggagt accttcgaga cacccctccc gtgccagtgg ttgtctgtga tgggagtgga
841 cgggcatcgg acatcctggc ctttgggcat aaatactcag aagaaggcgg gtaggtaact
901 ttccaggccc catggaagaa ccctaaagcc tgtttggaaa cgagggtatg agtggattat
961 gttttcagta gctcaaccaa gacctcaaat caaaacaagc tatgaacaaa ttgtctaaaa
1021 aatgtctgtc atgggagggc tg
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