LOCUS BC121165 1700 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens paired box 7, mRNA (cDNA clone MGC:150507
IMAGE:40121582), complete cds.
ACCESSION BC121165
VERSION BC121165.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC121165.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: i Column: 21.
FEATURES Location/Qualifiers
source 1..1700
/db_xref="H-InvDB:HIT000388362"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150507 IMAGE:40121582"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AGCCCCAA sequenced from
the forward primer"
gene 1..1700
/gene="PAX7"
/gene_synonym="HUP1"
/gene_synonym="PAX7B"
/db_xref="GeneID:5081"
/db_xref="HGNC:HGNC:8621"
/db_xref="MIM:167410"
CDS 81..1637
/gene="PAX7"
/gene_synonym="HUP1"
/gene_synonym="PAX7B"
/codon_start=1
/product="paired box 7"
/protein_id="AAI21166.1"
/db_xref="GeneID:5081"
/db_xref="HGNC:HGNC:8621"
/db_xref="MIM:167410"
/translation="MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGV
FINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG
GSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRI
KFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRS
RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGA
NQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYPTTTISQDGGSTVHRPQPLPPSTMHQ
GGLAAAAAAADTSSAYGARHSFSSYSDSFMNPAAPSNHMNPVSNGLSPQVMSILGNPS
AVPPQPQADFSISPLHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGY
SVDPVAGYQYGQYGQSECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEK
LKSSQMEQFT"
BASE COUNT 369 a 561 c 502 g 268 t
ORIGIN
1 aagagatcgc agcaggggtg aagggagcgg acgggaagcg atttttgccg actttggatt
61 cgtccccggc gtgcgcaaga atggcggccc ttcccggcac ggtaccgaga atgatgcggc
121 cggctccggg gcagaactac ccccgcacgg gattcccttt ggaagtgtcc accccgcttg
181 gccaaggccg ggtcaatcag ctgggagggg tcttcatcaa tgggcgaccc ctgcctaacc
241 acatccgcca caagatagtg gagatggccc accatggcat ccggccctgt gtcatctccc
301 gacagctgcg tgtctcccac ggctgcgtct ccaagattct ttgccgctac caggagaccg
361 ggtccatccg gcctggggcc atcggcggca gcaagcccag acaggtggcg actccggatg
421 tagagaaaaa gattgaggag tacaagaggg aaaacccagg catgttcagc tgggagatcc
481 gggacaggct gctgaaggat gggcactgtg accgaagcac tgtgccctca gtgagttcga
541 ttagccgcgt gctcagaatc aagttcggga agaaagagga ggaggatgaa gcggacaaga
601 aggaggacga cggcgaaaag aaggccaaac acagcatcga cggcatcctg ggcgacaaag
661 ggaaccggct ggacgagggc tcggatgtgg agtcggaacc tgacctccca ctgaagcgca
721 agcagcgacg cagtcggacc acattcacgg ccgagcagct ggaggagctg gagaaggcct
781 ttgagaggac ccactaccca gacatataca cccgcgagga gctggcgcag aggaccaagc
841 tgacagaggc gcgtgtgcag gtctggttca gtaaccgccg cgcccgttgg cgtaagcagg
901 caggagccaa ccagctggcg gcgttcaacc accttctgcc aggaggcttc ccgcccaccg
961 gcatgcccac gctgcccccc taccagctgc cggactccac ctaccccacc accaccatct
1021 cccaagatgg gggcagcact gtgcaccggc ctcagcccct gccaccgtcc accatgcacc
1081 agggcgggct ggctgcagcg gctgcagccg ccgacaccag ctctgcctac ggagcccgcc
1141 acagcttctc cagctactct gacagcttca tgaatccggc ggcgccctcc aaccacatga
1201 acccggtcag caacggcctg tctcctcagg tgatgagcat cttgggcaac cccagtgcgg
1261 tgcccccgca gccacaggct gacttctcca tctccccgct gcatggcggc ctggactcgg
1321 ccacctccat ctcagccagc tgcagccagc gggccgactc catcaagcca ggagacagcc
1381 tgcccacctc ccaggcctac tgcccaccca cctacagcac caccggctac agcgtggacc
1441 ccgtggccgg ctatcagtac ggccagtacg gccagagtga gtgcctggtg ccctgggcgt
1501 cccccgtccc cattccttct cccaccccca gggcctcctg cttgtttatg gagagctaca
1561 aggtggtgtc agggtgggga atgtccattt cacagatgga aaaattgaag tccagccaga
1621 tggaacagtt cacctaaaat gacactgagt tgggcaaaac ccaggacatc tcctggctaa
1681 gcctctgctt ccgtactatg
//