LOCUS BC121124 1188 bp mRNA linear HUM 06-OCT-2006
DEFINITION Homo sapiens haptoglobin, mRNA (cDNA clone MGC:150437
IMAGE:40120682), complete cds.
ACCESSION BC121124
VERSION BC121124.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1188)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1188)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: g Column: 13.
FEATURES Location/Qualifiers
source 1..1188
/db_xref="H-InvDB:HIT000388321"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150437 IMAGE:40120682"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CTACTC sequenced from the reverse primer"
gene 1..1188
/gene="HP"
/gene_synonym="hp2-alpha"
/db_xref="GeneID:3240"
/db_xref="HGNC:HGNC:5141"
/db_xref="MIM:140100"
CDS 25..1068
/gene="HP"
/gene_synonym="hp2-alpha"
/codon_start=1
/product="HP protein"
/protein_id="AAI21125.1"
/db_xref="GeneID:3240"
/db_xref="HGNC:HGNC:5141"
/db_xref="MIM:140100"
/translation="MSALGAVIALLLWGQLFAVDSGNDVTDIADDGCPKPPEIAHGYV
EHSVRYQCKNYYKLRTEGDGVYTLNDKKQWINKAVGDKLPECEAVCGKPKNPANPVQR
ILGGHLDAKGSFPWQAKMVSHHNLTTGATLINEQWLLTTAKNLFLNHSENATAKDIAP
TLTLYVGKKQLVEIEKVVLHPNYSQVDIGLIKLKQKVSVNERVMPICLPSKDYAEVGR
VGYVSGWGRNANFKFTDHLKYVMLPVADQDQCIRHYEGSTVPEKKTPKSPVGVQPILN
EHTFCAGMSKYQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDKSCAVAEYGVYVKVT
SIQDWVQKTIAEN"
BASE COUNT 329 a 267 c 329 g 263 t
ORIGIN
1 cttccagagg caagaccaac caagatgagt gccctgggag ctgtcattgc cctcctgctc
61 tggggacagc tttttgcagt ggactcaggc aatgatgtca cggatatcgc agatgacggc
121 tgcccgaagc cccccgagat tgcacatggc tatgtggagc actcggttcg ctaccagtgt
181 aagaactact acaaactgcg cacagaagga gatggagtat acaccttaaa tgataagaag
241 cagtggataa ataaggctgt tggagataaa cttcctgaat gtgaagcagt atgtgggaag
301 cccaagaatc cggcaaaccc agtgcagcgg atcctgggtg gacacctgga tgccaaaggc
361 agctttccct ggcaggctaa gatggtttcc caccataatc tcaccacagg tgccacgctg
421 atcaatgaac aatggctgct gaccacggct aaaaatctct tcctgaacca ttcagaaaat
481 gcaacagcga aagacattgc ccctacttta acactctatg tggggaaaaa gcagcttgta
541 gagattgaga aggttgttct acaccctaac tactcccagg tagatattgg gctcatcaaa
601 ctcaaacaga aggtgtctgt taatgagaga gtgatgccca tctgcctacc ttcaaaggat
661 tatgcagaag tagggcgtgt gggttatgtt tctggctggg ggcgaaatgc caattttaaa
721 tttactgacc atctgaagta tgtcatgctg cctgtggctg accaagacca atgcataagg
781 cattatgaag gcagcacagt ccccgaaaag aagacaccga agagccctgt aggggtgcag
841 cccatactga atgaacacac cttctgtgct ggcatgtcta agtaccaaga agacacctgc
901 tatggcgatg cgggcagtgc ctttgccgtt cacgacctgg aggaggacac ctggtatgcg
961 actgggatct taagctttga taagagctgt gctgtggctg agtatggtgt gtatgtgaag
1021 gtgacttcca tccaggactg ggttcagaag accatagctg agaactaatg caaggctggc
1081 cggaagccct tgcctgaaag caagatttca gcctggaaga gggcaaagtg gacgggagtg
1141 gacaggagtg gatgcgataa gatgtggttt gaagctgatg ggtgccat
//