LOCUS BC121075 486 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens syncollin, mRNA (cDNA clone MGC:150344 IMAGE:40119665), complete cds. ACCESSION BC121075 VERSION BC121075.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 486) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 486) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC121075.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 29 Row: d Column: 3. FEATURES Location/Qualifiers source 1..486 /db_xref="H-InvDB:HIT000388272" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:150344 IMAGE:40119665" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GGATCCCT sequenced from the reverse primer" gene 1..486 /gene="SYCN" /gene_synonym="FLJ27441" /gene_synonym="SYL" /db_xref="GeneID:342898" /db_xref="HGNC:HGNC:18442" CDS 17..421 /gene="SYCN" /gene_synonym="FLJ27441" /gene_synonym="SYL" /codon_start=1 /product="syncollin" /protein_id="AAI21076.1" /db_xref="GeneID:342898" /db_xref="HGNC:HGNC:18442" /translation="MSPLRPLLLALALASVPCAQGACPASADLKHSDGTRTCAKLYDK SDPYYENCCGGAELSLESGADLPYLPSNWANTASSLVVAPRCELTVWSRQGKAGKTHK FSAGTYPRLEEYRRGILGDWSNAISALYCRCS" BASE COUNT 77 a 188 c 137 g 84 t ORIGIN 1 aacaggcact gccaccatgt ccccgctgcg cccgctgctg ctggccctgg cccttgcctc 61 cgtgccttgc gcccagggcg cctgccccgc ctccgccgac ctcaagcact cggacgggac 121 gcgcacttgc gccaagctct atgacaagag cgacccctac tatgagaact gctgcggggg 181 cgccgagctg tcgctggagt cgggcgcaga cctgccctac ctgccctcca actgggccaa 241 caccgcctcc tcacttgtgg tggccccgcg ctgcgagctc accgtgtggt cccggcaagg 301 caaggcgggc aagacgcaca agttctctgc cggcacctac ccgcgcctgg aggagtaccg 361 ccggggcatc ttaggagact ggtccaacgc tatctccgcg ctctactgca ggtgcagctg 421 atgcattgct ggtctctcat ctgcagcttc cacagagtgc caagcccctc actcagccca 481 tccctg //