LOCUS BC121021 1960 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens CDK5 regulatory subunit associated protein 1-like 1,
mRNA (cDNA clone MGC:149680 IMAGE:40117363), complete cds.
ACCESSION BC121021
VERSION BC121021.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: i Column: 2.
FEATURES Location/Qualifiers
source 1..1960
/db_xref="H-InvDB:HIT000388218"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149680 IMAGE:40117363"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGCACAAC sequenced from the reverse primer"
gene 1..1960
/gene="CDKAL1"
/gene_synonym="FLJ20342"
/db_xref="GeneID:54901"
/db_xref="HGNC:HGNC:21050"
CDS 98..1837
/gene="CDKAL1"
/gene_synonym="FLJ20342"
/codon_start=1
/product="CDK5 regulatory subunit associated protein
1-like 1"
/protein_id="AAI21022.1"
/db_xref="GeneID:54901"
/db_xref="HGNC:HGNC:21050"
/translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQ
KYLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDAD
LWLLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQI
DRVVEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNAC
TYCKTKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLW
KLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMK
REYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFIN
QFYPRPGTPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSK
FYVAHNQFYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAK
GEVSGLTKDFRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLAL
LGLLFAFFVKVYN"
BASE COUNT 615 a 390 c 450 g 505 t
ORIGIN
1 cgggttgatt ttctcacttt ggactggttt ttacttcccg acttctggac tcatctttca
61 agaggacttt agactaattg cagataatta agagaatatg ccttctgcat cctgtgatac
121 actactggat gacatcgaag atatcgtgtc tcaggaagat tcaaaaccac aagataggca
181 ttttgtaaga aaggatgttg tcccgaaggt acgaaggcga aatacccaaa aatatttgca
241 agaggaagaa aacagtccac caagtgacag cactattcca ggcatacaga aaatttggat
301 acgaacatgg ggttgttctc ataataattc agatggagaa tatatggctg gacagctagc
361 tgcttatggc tataaaatta cagaaaatgc atccgatgca gatttatggc tcctgaacag
421 ttgcactgta aaaaacccag ctgaagacca ctttagaaac tcaattaaaa aagctcaaga
481 ggagaacaag aaaatcgtac tggctggatg cgttcctcaa gcccagcctc gccaggacta
541 ccttaaggga ctgagtatca ttggggttca gcagatagat cgtgtggtag aagttgtgga
601 ggagacaatt aaaggtcact ctgtgagact gctgggtcag aaaaaggata atggaaggcg
661 gcttggggga gcacgattgg atttgccgaa gattaggaag aatccactga tagaaatcat
721 ttccatcaat accgggtgtc tcaatgcttg tacctactgc aaaactaaac acgccagagg
781 aaatttggcc agttatccaa ttgatgaact agtagataga gccaaacaat cttttcaaga
841 gggtgtttgt gagatatggt tgaccagtga agacacgggg gcttatggca gagatattgg
901 caccaatctc cccacactcc tgtggaaact ggttgaagtg attcctgagg gagcaatgct
961 gaggcttggc atgacaaatc cgccctatat tttagagcat ctggaggaaa tggcaaaaat
1021 ccttaatcac cccagagtct acgcttttct gcacatacca gtccagtctg cctccgacag
1081 cgtactcatg gaaatgaaaa gagaatactg tgtggctgac ttcaaaagag tagtggattt
1141 tctgaaagag aaagttcctg gaataactat tgctacagat attatctgtg gttttcctgg
1201 agaaacagat caggattttc aagaaacagt gaaacttgtt gaagagtaca aattcccaag
1261 cctgtttatt aaccaatttt acccaagacc aggaactcct gctgcaaaaa tggaacaagt
1321 tccagcacaa gtgaaaaagc aaaggacaaa agatctttct cgggtgtttc attcttacag
1381 tccatatgat cacaagattg gtgaaagaca acaagtgtta gtaacagaag aatcttttga
1441 ttccaagttt tatgttgcac acaatcaatt ctatgagcag gttttagtgc caaagaaccc
1501 tgcgttcatg gggaagatgg ttgaagtgga catctatgaa tcaggcaaac attttatgaa
1561 agggcagcca gtatctgatg ccaaagtgta cacgccctcc atcagcaaac cgctagcaaa
1621 gggagaagtc tcgggtttga caaaggactt cagaaatggg cttgggaacc agctgagttc
1681 aggatcccac acctctgctg catctcagtg tgactcagcg agttccagaa tggtgctgcc
1741 catgccaagg ctacatcaag actgtgcgct gaggatgtcc gtgggcttgg ctctgctggg
1801 tcttcttttt gctttttttg tcaaggtcta taattagaat acaactaatg gaaacatcta
1861 taaagaagaa tacatttcta attaaaatct tcaatgaaca ggaaagcgac atctccattc
1921 tccaagggca ataatttgta ctggtcatgc tgcctccttc
//