LOCUS BC120999 1537 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens RAB6C, member RAS oncogene family, mRNA (cDNA clone
MGC:149591 IMAGE:40116526), complete cds.
ACCESSION BC120999
VERSION BC120999.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1537)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1537)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: e Column: 20.
FEATURES Location/Qualifiers
source 1..1537
/db_xref="H-InvDB:HIT000388196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149591 IMAGE:40116526"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CACATTA sequenced from
the forward primer"
gene 1..1537
/gene="RAB6C"
/gene_synonym="WTH3"
/db_xref="GeneID:84084"
/db_xref="HGNC:HGNC:16525"
CDS 293..1057
/gene="RAB6C"
/gene_synonym="WTH3"
/codon_start=1
/product="RAB6C, member RAS oncogene family"
/protein_id="AAI21000.1"
/db_xref="GeneID:84084"
/db_xref="HGNC:HGNC:16525"
/translation="MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQA
IIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQ
QTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKTG
YNVKQLFRRVAAALPGMESTQDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLP
QKPPYSFIDCSVNIGLNLFPSLITFCNSSLLPVSWR"
BASE COUNT 391 a 386 c 359 g 401 t
ORIGIN
1 gaagccaaag cacacccctg gctcctgccg acaccgccct ccttcccttc ccagccgcgg
61 gcctcgctcc gtgctcggct actctgccgg gaggcggcgg cggctgccag tctgtggcga
121 gccctgctgc cctccagccg ggcttctcca gccgggctcc tccaccggcc cttgcagggg
181 cacagagagc tcggcgcccg cccttccgct cgcctttttc gtcagccggc tggaggagca
241 tcggtccggg aggtctctgg gctgaggcgg cgacagctcc tctagttcca ccatgtccgc
301 gggcggagac ttcgggaatc cgctgaggaa attcaagctg gtgttcctgg gggagcaaag
361 cgttgcaaag acatctttga tcaccagatt caggtatgac agttttgaca acacctatca
421 ggcaataatt ggcattgact ttttatcaaa aactatgtac ttggaggatg gaacaatcgg
481 gcttcggctg tgggatacgg cgggtcagga acgtctccgt agcctcattc ccaggtacat
541 ccgtgattct gctgcagctg tagtagttta cgatatcaca aatgttaact cattccagca
601 aactacaaag tggattgatg atgtcagaac agaaagagga agtgatgtta tcatcacgct
661 agtaggaaat agaacagatc ttgctgacaa gaggcaagtg tcagttgagg agggagagag
721 gaaagccaaa gggctgaatg ttacgtttat tgaaactagg gcaaaaactg gatacaatgt
781 aaagcagctc tttcgacgtg tagcagcagc tttgccggga atggaaagca cacaggacgg
841 aagcagagaa gacatgagtg acataaaact ggaaaagcct caggagcaaa cagtcagcga
901 agggggttgt tcctgctact ctcccatgtc atcttcaacc cttcctcaga agccccctta
961 ctctttcatt gactgcagtg tgaatattgg cttgaacctt ttcccttcat taataacgtt
1021 ttgcaattca tcattgctgc ctgtctcgtg gaggtgatct attagcttca caagcacaaa
1081 aaaagtcagc gtcttcatta tttatatttt acaaaaagcc aaattatttc agcatattcc
1141 ggtgataact ttaaaaatta gatacatttt cttaacattt ttttcttttt taatgttatg
1201 ataatgtact tcaaaatgat ggaaatctca acagtatgag tatggcttgg ttaacgagca
1261 gtatgttcac agcctgcttt atctctcctt gctcttctca cctctccctt accccgttcc
1321 ctatttccgt gttcttacct agcctccccc cacttcctca aaacaaacaa gagatggcaa
1381 agcagcagtc cgaccaagcc cactggaatt atcctttaat tttacagata ccacttgctg
1441 taggctgtgg accaagatgt ccagaattat tcttgagcac tgatgtaaat tacttagatc
1501 ttctttgagg tcagaattca gcgatcacgg taggcag
//