LOCUS BC120969 1001 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens phospholipid scramblase 2, mRNA (cDNA clone MGC:149458
IMAGE:40115378), complete cds.
ACCESSION BC120969
VERSION BC120969.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC120969.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 29 Row: b Column: 22.
FEATURES Location/Qualifiers
source 1..1001
/db_xref="H-InvDB:HIT000388166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149458 IMAGE:40115378"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TATACATT sequenced from the reverse primer"
gene 1..1001
/gene="PLSCR2"
/db_xref="GeneID:57047"
/db_xref="HGNC:HGNC:16494"
/db_xref="MIM:607610"
CDS 299..973
/gene="PLSCR2"
/codon_start=1
/product="phospholipid scramblase 2"
/protein_id="AAI20970.1"
/db_xref="GeneID:57047"
/db_xref="HGNC:HGNC:16494"
/db_xref="MIM:607610"
/translation="MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMY
EIKNSFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCP
CCLQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDF
EITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYM
FFERTR"
BASE COUNT 296 a 206 c 226 g 273 t
ORIGIN
1 tcccagtgaa ccaccctcaa aatagaagtg aatgtgaaac cacagatatt tcattaaaac
61 atatctgaag ataaaaacat acctcaagct tcacagatat aggacttctg agctgagagg
121 acctcccgga catattgtct accctaagca ccaggctgga cacactggga aacaggctga
181 ccacctgggc tcccaggcct tctacccagg acgtcagcat gactacctag tcccacctgc
241 tggcacagct ggcattcctg ttcaaaatca gccaggtaga cctgaagggg taccatggat
301 gccagcacca ccaccaccat taaactgtcc gccaggattg gaatacttaa gtcagataga
361 tatgatacta attcatcagc aaattgaact tctggaagtt ctattcagtt ttgaaagtag
421 taacatgtat gaaatcaaga acagctttgg gcagaggatt tattttgcag cagaagatac
481 taatttctgt atccgaaatt gctgtgggcg gtctagacct tttaccttga ggattactga
541 taatgtgggt cgagaagtca taactctgga aagaccacta agatgtaact gttgttgttg
601 cccctgctgc cttcaggaga tagaaatcca agctcctcct ggtgtaccag taggttatgt
661 tactcagacc tggcacccat gtctaacaaa gtttacaatt aaaaatcaga aaagagagga
721 tgtactaaaa attagtggtc catgtatcgt gtgcagctgt attgcgggtg ttgattttga
781 gattacatct cttgatgaac aaattgtggt tggcaggatt tctaagcact ggtctgggtt
841 tttaagagag gcatttactg atgctgacaa ctttggaatc caattcccta gagaccttga
901 tgttaaaatg aaagccgtga tgattggtgc ctgtttcctc attgactaca tgttttttga
961 aagaactagg taatgactgg aatgtcagag tgtgggagtg g
//