LOCUS BC119813 3625 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens HEAT repeat containing 6, mRNA (cDNA clone MGC:148095
IMAGE:40108426), complete cds.
ACCESSION BC119813
VERSION BC119813.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-JUL-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: l Column: 18.
FEATURES Location/Qualifiers
source 1..3625
/db_xref="H-InvDB:HIT000388115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:148095 IMAGE:40108426"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert"
gene 1..3625
/gene="HEATR6"
/gene_synonym="ABC1"
/db_xref="GeneID:63897"
/db_xref="HGNC:HGNC:24076"
CDS 9..3554
/gene="HEATR6"
/gene_synonym="ABC1"
/codon_start=1
/product="HEAT repeat containing 6"
/protein_id="AAI19814.1"
/db_xref="GeneID:63897"
/db_xref="HGNC:HGNC:24076"
/translation="MAAVQVVGSWPSVQPREAPREAIPERGNGFRLLSARLCALRPDD
SSSARTEIHLLFDQLISENYSEGSGVAPEDVSALLVQACRLVPLNQNHLVSKVSQLIH
HLLNRLQVIVDEQHLDFLLAYTISAIHQCSSWTHREILQALAALVYCNGSKCQKYLPE
LLGNTGLLMKLSDLAQSDPEVRRAAVHCMANLCLSVPGQPYLEEPYQNVCFQAFLTIL
QSPKSSDMDDITFCMLLQNALKGIQSLLNGGRMKLTQTDELGALLAVLKKFMFHGLPG
LNIEMPTVLYPTPLPQYDGRTPIKPQQSESSASRPTLNKKKKSKVKPKKIQQGEEEEK
ESSGEIEAAPVTGTGRVNLHEGNTWCPSSLGVQSLPLDGSGAAEKDGVSSSFSSSSWK
RVSSSESDFSDAEGGMQSKMRSYQAKVRQGALVCFLSTIKSIEKKVLYGYWSAFIPDT
PELGSPQSVSLMTLTLKDPSPKTRACALQVLSAILEGSKQFLSVAEDTSDHRRAFTPF
SVMIACSIRELHRCLLLALVAESSSQTVTQIIKCLANLVSNAPYDRLKLSLLTKVWNQ
IKPYIRHKDVNVRVSSLTLLGAIVSTHAPLPEVQLLLQQPCSSGLGNSNSATPHLSPP
DWWKKAPAGPSLEETSVSSPKGSSEPCWLIRLCISIVVLPKEDSCSGSDAGSAAGSTY
EPSPMRLEALQVLTLLARGYFSMTQAYLMELGEVICKCMGEADPSIQLHGAKLLEELG
TGLIQQYKPDSTAAPDQRAPVFLVVMFWTMMLNGPLPRALQNSEHPTLQASACDALSS
ILPEAFSNLPNDRQMLCITVLLGLNDSKNRLVKAATSRALGVYVLFPCLRQDVIFVAD
AANAILMSLEDKSLNVRAKAAWSLGNLTDTLIVNMETPDPSFQEEFSGLLLLKMLRSA
IEASKDKDKVKSNAVRALGNLLHFLQPSHIEKPTFAEIIEESIQALISTVLTEAAMKV
RWNACYAMGNVFKNPALPLGTAPWTSQAYNALTSVVTSCKNFKVRIRSAAALSVPGKR
EQYGSVDQYARIWNALVTALQKSEDTIDFLEFKYCVSLRTQICQALIHLLSLASASDL
PCMKETLELSGNMVQSYILQFLKSGAEGDDTGAPHSPQERDQMVRMALKHMGSIQAPT
GDTARRAIMGFLEEILAVCFDSSGSQGALPGLTNQ"
BASE COUNT 967 a 899 c 854 g 905 t
ORIGIN
1 gagaaaagat ggctgctgtg caagttgtcg gttcgtggcc ttccgtgcag ccgcgggagg
61 caccgcggga agcaatccct gagcgaggca atgggtttcg cctcttgtct gccaggctct
121 gcgccctgcg cccggatgac agcagctccg cccgcaccga gatccacctg ctcttcgatc
181 agctcatctc cgagaactac agcgagggca gtggcgtggc cccggaggac gttagtgctc
241 ttcttgtcca ggcttgccga ctggtacctc ttaatcagaa tcatcttgtc agcaaagtga
301 gccagcttat ccaccattta cttaacagat tacaggtaat tgttgatgaa cagcacttgg
361 atttcctgtt ggcatatact atttcggcta ttcatcagtg tagttcctgg acacacaggg
421 aaattcttca agccctggca gctctggtgt actgcaatgg ctccaaatgt caaaagtacc
481 tcccagagct gctaggcaac accggactct taatgaagtt gagtgacttg gctcagtctg
541 atcctgaagt caggagagct gcagtacatt gtatggcaaa cttatgtctc agtgtgccag
601 gacagccgta tttggaggag ccctaccaaa atgtctgttt ccaagctttt ctgactattt
661 tacagtctcc aaaatcatct gatatggatg atatcacatt ttgcatgtta ttgcaaaatg
721 cattaaaagg tatacagtca cttctaaatg gtgggagaat gaaactaaca cagactgatg
781 aacttggagc acttttagct gtgctaaaga aattcatgtt tcacggactc cctggactaa
841 acatagagat gcccacggtg ttatacccaa ctccgcttcc tcagtatgat gggcgaacac
901 ctatcaaacc acagcaatca gaatccagtg cttctcgacc aactttgaat aaaaagaaaa
961 aatccaaagt aaaaccaaag aaaatccagc aaggagagga ggaggaaaag gaatccagtg
1021 gtgaaataga ggcagcccca gtcactggca caggcagagt gaacctgcat gaagggaaca
1081 cttggtgtcc ctcctccctg ggtgtccaga gtttgccttt agatggaagt ggagctgcag
1141 aaaaagatgg agtctcctca tccttcagtt cttccagttg gaaaagggtc agcagtagtg
1201 agtcagactt ttctgatgct gaaggaggca tgcagagtaa aatgaggtct taccaagcta
1261 aagttcgcca aggagcctta gtttgttttc tttctactat aaaatcgata gaaaaaaaag
1321 ttctttatgg ctactggtca gcttttattc ctgatacgcc tgaacttggc agcccacagt
1381 cagtgtcctt gatgactctt acattgaaag acccttctcc aaagacacgt gcctgtgctc
1441 tgcaagtttt atctgccatc ttggaaggct caaagcagtt tctttctgtt gctgaagata
1501 ccagtgacca cagaagggct tttaccccct tctccgtaat gatcgcttgc agcattagag
1561 agttgcacag atgtcttttg ttagctttgg tggcggagtc atcctcacag accgttactc
1621 agataattaa gtgccttgca aatttagtat caaatgcacc ttatgatcgt ctaaaactca
1681 gcctgctgac caaagtctgg aaccagataa agccttatat tcgccacaaa gatgttaatg
1741 ttcgtgtgtc aagtctcaca ctcttgggag ctatagtgtc cacccacgca cctttacctg
1801 aagtccaact acttctgcaa cagccatgtt cttctggact cggtaatagc aattcagcaa
1861 cccctcacct cagccctcct gattggtgga agaaagcccc tgcaggaccc tctctggaag
1921 aaacgtcagt tagctcacct aaggggtctt cagagccctg ctggctcatt cgactctgca
1981 tttccattgt cgtactgccc aaggaggatt cctgttcagg tagcgatgct ggctctgcag
2041 caggaagcac ctacgaacca tcccccatgc gactggaggc cttacaggta ttgactcttc
2101 tggcaagggg ctacttttca atgactcaag cctacttgat ggagcttgga gaggtgattt
2161 gcaagtgcat gggggaagca gatccatcca ttcagcttca tggagcaaag cttctggaag
2221 aactgggcac aggcttaata cagcagtata aaccagactc cactgcagca cctgatcaga
2281 gagcaccagt cttcttggtg gtgatgttct ggactatgat gctgaacggt cctttaccca
2341 gagccctgca gaattcagaa cacccaactc tccaggcgag cgcctgtgat gccctgtctt
2401 ccatcttgcc agaggccttc agcaatctgc cgaatgacag gcagatgctg tgcatcacag
2461 tgctgctcgg gctgaatgac agcaagaatc gcttagtgaa agctgcaact tcacgggccc
2521 tgggagtcta tgtgcttttt ccctgtctca gacaggatgt catatttgtt gcagacgcag
2581 caaatgcaat attgatgtca cttgaagaca agtctctgaa tgttcgagcc aaagcagcct
2641 ggtccctggg caacctgaca gacactctga ttgtcaacat ggaaacacca gacccaagtt
2701 tccaggaaga gttctctggt ctcctgctct tgaaaatgtt acgatcagct atagaagcat
2761 ccaaggataa agacaaggta aaaagcaatg cagtccgggc ccttggaaat ttgcttcatt
2821 ttctgcaacc ctctcatata gaaaaaccca catttgcaga aatcattgag gagtctatcc
2881 aggccctaat ttctactgtt ctaacagaag ctgccatgaa agtccgatgg aatgcttgtt
2941 atgcaatggg aaatgtattt aaaaatcctg cccttccttt agggacagcc ccatggacct
3001 cccaggccta caatgccctg acatcggtcg tgacatcatg caagaacttc aaagtgcgca
3061 tcagatctgc agctgccctt tccgtcccgg ggaagagaga gcagtacggg tctgttgacc
3121 agtatgctcg gatctggaat gcattggtca ccgctttaca gaagagtgaa gacaccatag
3181 actttttgga attcaagtac tgtgtcagcc tacggaccca aatctgccag gcactgattc
3241 acctcttgag cttggccagt gcctcggacc tcccttgtat gaaagaaacc cttgaactga
3301 gtgggaatat ggtccagtcc tatattctac agtttttaaa atcaggagca gagggagatg
3361 acactggagc accccacagc ccacaggaaa gagaccagat ggtcagaatg gcccttaaac
3421 acatgggcag catccaggca ccaactggag acacagccag aagggccatc atgggctttt
3481 tagaagagat cctggccgtt tgttttgact catctggatc acaaggggca ctcccagggt
3541 taacaaatca gtgaagatcc caccatactt tctagatgtc gaaggcggca gtaggaagac
3601 ctgagcttga gcataagatc tgtgg
//