LOCUS BC119766 845 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens chromosome 18 open reading frame 21, mRNA (cDNA clone
MGC:149890 IMAGE:40119357), complete cds.
ACCESSION BC119766
VERSION BC119766.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 845)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 845)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: p Column: 20.
FEATURES Location/Qualifiers
source 1..845
/db_xref="H-InvDB:HIT000388085"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149890 IMAGE:40119357"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGCATTCA sequenced from the reverse primer"
gene 1..845
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/db_xref="GeneID:83608"
/db_xref="HGNC:HGNC:28802"
CDS 55..717
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/codon_start=1
/product="chromosome 18 open reading frame 21"
/protein_id="AAI19767.1"
/db_xref="GeneID:83608"
/db_xref="HGNC:HGNC:28802"
/translation="MRQKHYLEAAARGLHDSCPGQARYLLWAYTSSHDDKSTFEETCP
YCFQLLVLDNSRVRLKPKARLTPKIQKLLNREARNYTLSFKEAKMVKKFKDSKSVLLI
TCKTCNRTVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPA
SVFRTPTSGQSVSTCSSKNTSKTKKHFSQLKMLLSQNESQKIPKVDFRNFLSSLKGGL
LK"
BASE COUNT 272 a 198 c 172 g 203 t
ORIGIN
1 cgccctattt tctcacctgg ttcccgcggc gagccagcgg cagcggcggc ggcgatgaga
61 cagaagcact accttgaggc tgcagcgcgg ggactgcacg acagctgccc gggccaagcc
121 cgctacctcc tctgggccta cacttcgtcg cacgatgata agagcacttt tgaagaaacg
181 tgtccatact gtttccagct gttggttctg gataactctc gagtgcgtct caaacccaaa
241 gccaggttga cacccaaaat acagaaactt cttaatcgag aagcgagaaa ctatacactc
301 agttttaaag aagcaaaaat ggtgaaaaag ttcaaagact ccaaaagtgt attgttgatc
361 acttgtaaaa catgcaacag aacagtgaaa catcatggta aaagtagaag ctttgtgtca
421 acattgaaga gcaatcctgc cactcctaca agtaaactca gcctgaagac accagagaga
481 aggactgcaa acccaaatca tgacatgtct ggctcgaaag gcaagagccc agcatcggtt
541 ttcagaacac ctacatctgg acagtcagta tctacttgct cctcaaagaa caccagcaaa
601 acaaagaaac acttctctca actaaaaatg ttacttagtc agaatgaatc ccaaaagatt
661 ccaaaggtgg acttcagaaa tttcttatct tctctgaagg gtggactttt aaaataagaa
721 atgcctgatg tcaattctga aactaaagtt ggtaaaacaa ctttttaaac tcttattcat
781 tttttgaata catggaaact agatctgaat gcaaactttt cttggcatcc ttcagtgttt
841 atggg
//