LOCUS BC119647 1184 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, delta, mRNA (cDNA clone MGC:149504
IMAGE:40115788), complete cds.
ACCESSION BC119647
VERSION BC119647.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 27 Row: b Column: 14.
FEATURES Location/Qualifiers
source 1..1184
/db_xref="H-InvDB:HIT000387966"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149504 IMAGE:40115788"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TACCACCA sequenced from
the forward primer"
gene 1..1184
/gene="NFKBID"
/gene_synonym="IkappaBNS"
/gene_synonym="TA-NFKBH"
/db_xref="GeneID:84807"
/db_xref="HGNC:HGNC:15671"
CDS 99..1040
/gene="NFKBID"
/gene_synonym="IkappaBNS"
/gene_synonym="TA-NFKBH"
/codon_start=1
/product="nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, delta"
/protein_id="AAI19648.1"
/db_xref="GeneID:84807"
/db_xref="HGNC:HGNC:15671"
/translation="MEAGPWRVSAPPSGPPQFPAVVPGPSLEVARAHMLALGPQQLLA
QDEEGDTLLHLFAARGLRWAAYAAAEVLQVYRRLDIREHKGKTPLLVAAAANQPLIVE
DLLNLGAEPNAADHQGRSVLHVAATYGLPGVLLAVLNSGVQVDLEARDFEGLTPLHTA
ILALNVAMRPSDLCPRVLSTQARDRLDCVHMLLQMGANHTSQEIKSNKTVLHLAVQAA
NPTLVQLLLELPRGDLRTFVNMKAHGNTALHMAAALPPGPAQEAIVRHLLAAGADPTL
RNLENEQPVHLLRPGPGPEGLRQLLKRSRVAPPGLSS"
BASE COUNT 207 a 391 c 350 g 236 t
ORIGIN
1 gcccctactc ttgccctgct tctgctgccg aaaatttcct gcctcctgac ttctacccac
61 cctcggaccc agggcagccg tgcccatttc cccagggcat ggaggctgga ccctggagag
121 tttctgcacc cccttcagga cccccacagt tccccgctgt ggtccctgga ccatcgctgg
181 aggtggcccg agctcacatg ctggctttgg ggccacagca gctgctggcc caggatgagg
241 agggggacac gctccttcac ctgtttgcgg ctcgggggct gcgctgggcg gcatatgctg
301 cggctgaggt gctccaggtg taccggcgtc ttgacattcg tgagcataag ggcaagaccc
361 ctctcctggt ggcggctgct gccaaccagc ccctgattgt ggaggatctg ttgaacctgg
421 gagcagagcc caatgccgct gaccatcagg gacgttcggt cttgcacgtg gccgctacct
481 acgggctccc aggagttctc ttggctgtgc ttaactctgg ggtccaggtt gacctggaag
541 ccagagactt cgagggcctc accccgctcc acacggccat cctggccctt aacgttgcta
601 tgcgcccttc cgacctctgt ccccgggtgc tgagcacaca ggcccgagac aggctggatt
661 gtgtccacat gttgctgcaa atgggtgcta atcacaccag ccaggagatc aagagcaaca
721 agacagttct gcacttggcc gtgcaggctg ccaaccccac tctggttcag ctgctgctgg
781 agctgccccg gggagacctg cggacctttg tcaacatgaa ggcccacggg aacacagccc
841 tccacatggc ggctgccctg ccccctgggc cggcccagga ggccatcgtg cggcacctgt
901 tggcagctgg ggcggacccc acactgcgca acctggagaa tgagcagccc gttcacctgc
961 tgcggcccgg gccgggccct gaggggctcc ggcagctgtt gaagaggagc cgtgtggcgc
1021 cgccaggcct gtcctcttag gactcaaacc cagaccctgg actgattttc cagtccccac
1081 cgtcctgcgg gacagccagc gtatgctaat gttgcaaacc catgataatg tatgtggaat
1141 atcctgccat tggggtttta cattaaaacc ccagaatggc tgca
//