LOCUS BC119015 2261 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ankyrin repeat and LEM domain containing 1, mRNA (cDNA
clone IMAGE:40085199), with apparent retained intron.
ACCESSION BC119015
VERSION BC119015.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2261)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2261)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUL-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: j Column: 23
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2261
/db_xref="H-InvDB:HIT000387938"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40085199"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AAGGAGGC"
BASE COUNT 419 a 692 c 737 g 413 t
ORIGIN
1 ggaaatcgac cgaccaggcg gtgcgcttcg gacccagcca gggcatgtgc tcggaggccc
61 gcctggctcg cagggcagta gaggagctgc tgcgctgcgg cacggaccct aatttggtgc
121 tagaggacgg cgcagcggct gtgcacttgg cggccggagc ccggcacccg cgcggcctgc
181 gttgcctcgg ggccctactg cgccaaggcg gggaccccaa cgttcgatct gtcgaggcac
241 tgacgccgct gcatgtggcc gccgcctggg gctgccgccg cggcctggag cagctgctga
301 gccaaggagc ggacccggcg ctgcgcgacc aggttgggag gcactgcgcg ggcaaagaaa
361 ggctgggtga gcccagaggg agggaaggaa ggtaagaggg cctcgggcgc cccctgctga
421 ccgcgcccct gtaggacgga ctccggccgc tggacctggc cctgcagcag ggacacctgg
481 agtgcgcgcg agtcctgcag gatctcgaca cgcggaccag gacccggacc cggatcgggg
541 cagagactca ggagcccgag cctgcacctg gcaccccagg cctctctgga cctaccgatg
601 agacgctgga ctccatagca ctccaaaagc agccatgcag aggtgacaac agggacattg
661 gctgggaggc tgacccagga ccccccagcc tccctgttcc ccttgaaact gtggacaaac
721 atgggagctc ggcgtcccct ccagggcact gggattacag ctcagacgcc tctttcgtca
781 cagcggttga ggtctctgga gctgaggacc cagcctcgga cactcccccc tgggctgggt
841 cattgccacc gaccaggcag ggacttctgc atgttgtcca tgccaaccag agggtaccta
901 ggtctcaggg cacggaggca gaactgaatg cccgtctgca ggccctgact ctgaccccac
961 caaatgctgc tggcttccag tcctcccctt cctccatgcc tctcctggac aggagtccag
1021 ctcatagccc cccacggaca ccaccccctg gagcttctga ctgccactgc ctgtgggagc
1081 accagacatc cattgatagt gacatggcca cgctctggct gacagaggat gaggcaagct
1141 ctacaggtgg cagggaacct gtcggccctt gccggcacct gccagtctcc actgtgtctg
1201 acttggagtt gctgaaggga ctccgagcac ttggtgagaa tcctcacccc atcacaccct
1261 tcaccaggca gttgtaccac cagcagctgg aagaagccca gattgctcct ggcccagagt
1321 tttcagggca cagcctagaa ctggctgcag ccctgcggac gggctgtatt ccagatgtcc
1381 aggcagatga agacgcgctg gcccagcagt ttgagcggcc agatcctgcc aggaggtggc
1441 gggagggggt cgtgaagtct agcttcacgt atctgctgct ggaccccagg gagactcagg
1501 acctgccagc ccgagccttc tcactgaccc cagctgagcg ccttcagact ttcatccgtg
1561 ccatcttcta cgtgggcaaa gggacgaggg cccggccata tgtccacctc tgggaggccc
1621 ttggtcacca tgggcggtca agaaaacagc cccaccaggc ctgccccaag gtgcgtcaga
1681 tcttggacat ctgggccagt ggttgcggtg ttgtgtccct acattgcttc cagcacgtgg
1741 tcgctgtgga ggcttataca cgggaggcgt gtattgtgga agccctaggg atccagacgc
1801 tcaccaacca gaagcaaggg cactgctatg gagtggtggc aggctggcca cctgctcgtc
1861 gccggcgctt gggggtgcac ctgctgcacc gtgccctcct tgtcttcctg gctgaaggcg
1921 agcgacagct tcatccccag gacatccagg cccggggctg agtgctgggg agttggccat
1981 ccagcctggg gagaaatgtt tgaatgttcc agctgcccca tgctgacagc agcccccatc
2041 tctggtttca gaaggggtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgttt
2101 gtgtgtgtgt gtgtgtgtgt agggagcacc caggcagatc tcccccaggc tgagagagga
2161 ctttgttaca gatggtactg ctggagaggt agtaagtagt gagctcccca tcgtgggagg
2221 aggacaagaa gggaagcaga aggtgctttg gaacagtccg g
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