LOCUS BC119009 2204 bp mRNA linear HUM 09-AUG-2006
DEFINITION Homo sapiens transglutaminase 5, mRNA (cDNA clone MGC:141908
IMAGE:40085374), complete cds.
ACCESSION BC119009
VERSION BC119009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUL-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: j Column: 11.
FEATURES Location/Qualifiers
source 1..2204
/db_xref="H-InvDB:HIT000387933"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141908 IMAGE:40085374"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTTAGGAG"
gene 1..2204
/gene="TGM5"
/gene_synonym="TGM6"
/gene_synonym="TGMX"
/gene_synonym="TGX"
/db_xref="GeneID:9333"
/db_xref="HGNC:HGNC:11781"
/db_xref="MIM:603805"
CDS 9..2171
/gene="TGM5"
/gene_synonym="TGM6"
/gene_synonym="TGMX"
/gene_synonym="TGX"
/codon_start=1
/product="transglutaminase 5"
/protein_id="AAI19010.1"
/db_xref="GeneID:9333"
/db_xref="HGNC:HGNC:11781"
/db_xref="MIM:603805"
/translation="MAQGLEVALTDLQSSRNNVRHHTEEITVDHLLVRRGQAFNLTLY
FRNRSFQPGLDNIIFVVETGPLPDLALGTRAVFSLARHHSPSPWIAWLETNGATSTEV
SLCAPPTAAVGRYLLKIHIDSFQGSVTAYQLGEFILLFNPWCPEDAVYLDSEPQRQEY
VMNDYGFIYQGSKNWIRPCPWNYGQFEDKIIDICLKLLDKSLHFQTDPATDCALRGSP
VYVSRVVCAMINSNDDNGVLNGNWSENYTDGANPAEWTGSVAILKQWNATGCQPVRYG
QCWVFAAVMCTVMRCLGIPTRVITNFDSGHDTDGNLIIDEYYDNTGRILGNKKKDTIW
NFHVWNECWMARKDLPPAYGGWQVLDATPQEMSNGVYCCGPASVRAIKEGEVDLNYDT
PFVFSMVNADCMSWLVQGGKEQKLHQDTSSVGNFISTKSIQSDERDDITENYKYEEGS
LQERQVFLKALQKLKARSFHGSQRGAELQPSRPTSLSQDSPRSLHTPSLRPSDVVQVS
LKFKLLDPPNMGQDICFVLLALNMSSQFKDLKVNLSAQSLLHDGSPLSPFWQDTAFIT
LSPKEAKTYPCKISYSQYSQYLSTDKLIRISALGEEKSSPEKILVNKIITLSYPSITI
NVLGAAVVNQPLSIQVIFSNPLSEQVEDCVLTVEGSGLFKKQQKVFLGVLKPQHQASI
ILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDFAL"
BASE COUNT 559 a 606 c 581 g 458 t
ORIGIN
1 cagctaccat ggcccaaggg ctagaagtgg ccctcacaga cctccagagc tccagaaata
61 atgtgcggca ccacacggag gagatcactg tggaccacct gcttgttcgc cggggccagg
121 ccttcaacct caccctgtac ttcaggaacc ggagcttcca gccaggcctg gacaacatca
181 tcttcgtggt tgaaactgga ccgctgccag acctggcctt ggggactcgg gctgtgttca
241 gcctggcacg ccatcacagc cccagcccct ggattgcctg gctggagacc aatggggcca
301 cctccacaga ggtgagcttg tgcgctcctc ccacggcggc cgtgggtcgg tacctcttga
361 aaatccacat cgactccttc caggggtctg tgacggccta ccagctaggg gagttcatcc
421 tgcttttcaa tccctggtgc ccagaggatg ctgtctactt ggacagtgaa ccccagaggc
481 aggagtatgt catgaatgat tatggcttca tctaccaagg cagcaagaac tggatccgcc
541 catgtccctg gaactatgga cagtttgaag acaaaatcat agacatctgc ctgaagctgc
601 tagacaagag cctgcacttc cagactgacc cagccacaga ctgtgctctg cggggaagcc
661 ccgtctacgt cagcagagtg gtgtgtgcca tgatcaacag caatgatgat aatggggtgc
721 tcaatggaaa ctggagtgag aattacacag acggcgccaa ccctgcggag tggacgggca
781 gcgtggccat cctgaagcag tggaacgcca caggctgcca gcccgtgcgc tacgggcaat
841 gctgggtctt tgctgccgtc atgtgcacag tgatgaggtg tctggggatc cctacccgtg
901 tgatcaccaa cttcgactct ggccacgata cagatggaaa cctgatcata gatgagtatt
961 atgacaacac aggcaggatt ttggggaata agaagaagga tactatctgg aacttccatg
1021 tctggaatga gtgctggatg gcccggaagg atctgccccc tgcatatgga ggctggcagg
1081 tgctggacgc cacacctcag gagatgagca acggcgtcta ctgctgtggc cctgcctctg
1141 tcagagccat caaagaagga gaagtggacc tgaactatga cacgcccttt gtgttttcga
1201 tggtgaatgc tgactgcatg tcctggctcg tccagggagg gaaggagcag aagcttcacc
1261 aggacacgag ttctgttggc aattttatca gcacaaagag catccagagt gacgagcggg
1321 atgacatcac agagaactac aagtatgaag aaggatccct ccaggagagg caggtgtttc
1381 tgaaggctct gcagaagctg aaggctagaa gcttccatgg ctcccaaaga ggagcagagt
1441 tgcaaccttc caggcccaca tcactgagcc aggacagccc tcggagcctg catacacctt
1501 cccttcgacc cagtgatgtg gtgcaagtct ccctgaaatt caagctgctc gacccgccca
1561 acatgggcca ggatatatgc tttgtcctgc tggccctcaa catgtcctcc cagttcaagg
1621 acctcaaagt gaacctgagt gcccagtctc tgctgcacga tggcagcccc ctgtccccat
1681 tctggcagga cacagcgttc atcacactct ctcctaaaga agcaaagacc tacccctgca
1741 aaatctccta ttcccagtac agccagtacc tgtcaacaga caagctgatc cgcatcagtg
1801 ccctgggtga agagaaaagc agtcctgaga aaatcctggt gaacaagatc atcaccttat
1861 cttatccaag catcacgatt aatgttctag gagcagccgt tgtgaaccag ccactctcca
1921 tacaggtgat attttcaaac cccctctcgg agcaggttga ggactgtgtg ctgactgtgg
1981 aaggaagtgg cctcttcaag aaacagcaga aagtcttcct tggagtcctc aaaccccaac
2041 accaagcaag catcattctg gagaccgtcc ccttcaagag tggacaaagg cagatccaag
2101 ctaatatgag aagcaacaag tttaaggaca ttaagggtta caggaatgtt tatgtagact
2161 ttgcattata aattctggaa caacgcgcca gacgtgtgag tttc
//