LOCUS BC118545 1108 bp mRNA linear HUM 01-JUL-2006
DEFINITION Homo sapiens vestigial like 2 (Drosophila), mRNA (cDNA clone
IMAGE:40000693), complete cds.
ACCESSION BC118545
VERSION BC118545.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1108)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1108)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 26 Row: a Column: 3
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1108
/db_xref="H-InvDB:HIT000387838"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40000693"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TATGGTCA"
gene 1..1108
/gene="VGLL2"
/gene_synonym="VGL2"
/gene_synonym="VITO1"
/db_xref="GeneID:245806"
/db_xref="HGNC:HGNC:20232"
/db_xref="MIM:609979"
CDS 174..605
/gene="VGLL2"
/gene_synonym="VGL2"
/gene_synonym="VITO1"
/codon_start=1
/product="vestigial like 2 (Drosophila)"
/protein_id="AAI18546.1"
/db_xref="GeneID:245806"
/db_xref="HGNC:HGNC:20232"
/db_xref="MIM:609979"
/translation="MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNAS
PSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEH
FSRALSQPSSYSPSCTSSKAPRSSGPWRARRYSLCGASLLS"
BASE COUNT 276 a 299 c 273 g 260 t
ORIGIN
1 cgcaggagtg ggagggtagc gagccagctg gattccgagc cgcggagcgc gctggctttg
61 ctccgcctga tgactccaga gcgcgggtcc aagcgccgcc catgcagcac ccctgagctc
121 cggggaagga gagttaatga aaaaacactt aaccgtctcc gctgcggaga gtcatgagct
181 gtctggatgt tatgtaccaa gtctatggtc ctccgcagcc ctacttcgca gccgcctaca
241 ccccctacca ccagaaacta gcctattatt ccaaaatgca ggaagcgcag gagtgcaatg
301 ccagccccag cagcagtggc agcggcagct cctcattttc cagccaaacc ccagccagta
361 taaaagagga agaaggcagc ccagagaaag agcgcccacc agaggcagag tacatcaact
421 cccgctgcgt cctcttcact tatttccagg gggacatcag ctccgtggtg gatgaacatt
481 tcagcagggc cctgagccaa cccagcagct actctcctag ctgtaccagc agcaaagcac
541 caaggagctc tgggccctgg cgagctcgtc gttattccct ctgtggtgca tccctcctga
601 gctgatctgc tgacccaggg tttccccttc cccttccctt ctgaccagcc ttggaggctc
661 agcatctgtg cctctcactc cgtggatgag gacatggggg aaggcagaga cttcagactt
721 ctcagtgtgt tgggaaaacc aaaaaccaca actacagaaa ttcatctaaa aataagtcct
781 gctgctgaaa gagcaaatcc aaagactgag ttatgtttaa tgacttttgg ccgaatcact
841 ggaaatatct gtggtgagat tgctgagtca ggtgatgtga tatcataagc tttcttggaa
901 cgggggaaag aaaatgaaac tttttggtgt gaatattttt tatgctgatg tgaattattt
961 tgttaggtag tgtgattata gcactactac tgtcagattt taaattgtat gtgtacttgc
1021 atctaagact gtggtagaga agtaaagaga agtcaattcc ttcttcctca cctctcagcc
1081 tccagatccc ttcctgccca tcccttcc
//