LOCUS       BC117685                 671 bp    mRNA    linear   HUM 04-OCT-2006
DEFINITION  Homo sapiens SNF2 histone linker PHD RING helicase, mRNA (cDNA
            clone IMAGE:40071170), complete cds.
ACCESSION   BC117685
VERSION     BC117685.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 671)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 18 Row: j Column: 19
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..671
                     /db_xref="H-InvDB:HIT000387819"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40071170"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_282"
                     /note="Vector: pCR-Blunt II-TOPO; Clone identification
                     sequence tag: GGCTATTT sequenced from the reverse primer"
     gene            1..671
                     /gene="SHPRH"
                     /gene_synonym="bA545I5.2"
                     /gene_synonym="FLJ90837"
                     /gene_synonym="KIAA2023"
                     /db_xref="GeneID:257218"
                     /db_xref="HGNC:HGNC:19336"
                     /db_xref="MIM:608048"
     CDS             66..533
                     /gene="SHPRH"
                     /gene_synonym="bA545I5.2"
                     /gene_synonym="FLJ90837"
                     /gene_synonym="KIAA2023"
                     /codon_start=1
                     /product="SHPRH protein"
                     /protein_id="AAI17686.1"
                     /db_xref="GeneID:257218"
                     /db_xref="HGNC:HGNC:19336"
                     /db_xref="MIM:608048"
                     /translation="MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPC
                     PGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIV
                     ISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNNNEVFLLL"
BASE COUNT          203 a          119 c          147 g          202 t
ORIGIN      
        1 gagccgcttg tgggtctttc ggaagataac tgaagttcac agttaccagc caagaaaact
       61 tgaaaatgag cagccgacgg aaacgtgctc ctccagtgag ggtagatgag gaaaagaggc
      121 agcagcttca ttggaatatg catgaggaca gaaggaatga acctatcatc ataagtgatg
      181 atgacgagca gccctgccca ggttcagata cctcttctgc tcattatatc attctaagtg
      241 atagtctaaa ggaagaagtg gctcacagag ataagaagag gtgttcaaaa gtggtgagct
      301 tctcaaaacc aattgaaaaa gaagagactg ttggtatttt ttcccctttg tctgtaaagt
      361 taaatattgt gatttctccc tatcattttg ataattcctg gaaagcattt ctaggagaat
      421 taactcttca gcttcttcct gcacagagtt taattgaaaa tttttccgaa aggagtatta
      481 cattgatgag ttcagagtca agcaataata acgaagtgtt tcttcttctg tgaggaatta
      541 atggactttg aaattgctga ataaggagta gcttgttaca tcctagccat ttgatgtaat
      601 acaaatgttc ttatttggct tccttttctt tgagccttca gagttttaaa ggaccctctt
      661 tgaccctcag g
//