LOCUS BC117672 3535 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens caprin family member 2, mRNA (cDNA clone MGC:134847 IMAGE:40068103), complete cds. ACCESSION BC117672 VERSION BC117672.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3535) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3535) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 18 Row: i Column: 5. FEATURES Location/Qualifiers source 1..3535 /db_xref="H-InvDB:HIT000387806" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:134847 IMAGE:40068103" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: CTATATTA sequenced from the reverse primer" gene 1..3535 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" CDS 549..3431 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /codon_start=1 /product="CAPRIN2 protein" /protein_id="AAI17673.1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" /translation="MEVQVSQASLGFELTSVEKSLREWSRLSREVIAWLCPSSPNFIL NFPPPPSASSVSMVQLFSSPFGYQSPSGHSEEEREGNMKSAKPQVNHSQHGESQRALS PLQSTLSSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQ LEAVEKYEEVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTIL QVQYVLQNLTQEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESLSVEDQME QSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFESIPVPKNAKEKEVPLEEEM LIQSEKKTQLSKTESVKESESLMEFAQPEIQPQEFLNRRYMTEVDYSNKQGEEQPWEA DYARKPNLPKRWDMLTEPDGQEKKQESFKSWEASGKHQEVSKPAVSLEQRKQDTSKLR STLPEEQKKQEISKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQLQKEQDPK KQTPKSWTPSMQSEQNTTKSWTTPMCEEQDSKQPETPKSWENNVESQKHSLTSQSQIS PKSWGVATASLIPNDQLLPRKLNTEPKDVPKPVHQPVGSSSTLPKDPVLRKEKLQDLM TQIQGTCNFMQESVLDFDKPSSAIPTSQPPSATPGSPVASKEQNLSSQSDFLQEPLQA TSSPVTCSSNACLVTTDQASSGSETEFMTSETPEAAIPPGKQPSSLASPNPPMAKGSE QGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKESPYSPGYNQSFTTAS TQTPPQCQLPSIHVEQTVHSQETANYHPDGTIQVSNGSLAFYPAQTNVFPRPTQPFVN SRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQFQAREYSGAPYS QRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR" BASE COUNT 1104 a 789 c 795 g 847 t ORIGIN 1 tagggcacgg gaagggctcg ctagaatgag ctcttaaact ggttgggtgt aagcggtttt 61 gggctagtct aaaccaaaca actgagaata aacgcggggt tcctgcaggt tgagagagta 121 cctgtctgca aatgtccagt agtgatggat tgccttgtag gccccagagc aatcggggaa 181 gttagcattc ttgttcaaga agctgctggt tcacttagag ctataaaaga atgttgtgag 241 tttggatttt cttccaaacg ttcaggattg aggttagggc tggtggtgag ggatcatgta 301 aagaggtttg agtggctcag ccttaggtcc cggtgtggaa agcttattct tttggtgtca 361 tcacgtggcc atgggaatta tttagaatgt gatctgccct catgagaaga aaggagctct 421 gaagccgttg cagttcttcc tccctatgtg gaaaatcgaa tttctggaaa catcctccgt 481 attgggagat tttgcctatg taaaggctat ccttattggc tagcggcact aattacttta 541 aaagtaggat ggaagtacaa gtatctcaag catcattggg tttcgagctc acttctgtgg 601 aaaagagttt aagggagtgg tctagacttt ccagggaagt tattgcctgg ctgtgtccct 661 ctagtcctaa ttttatactt aactttcccc cacctccttc agcctcatct gtttcaatgg 721 tgcaactctt ttcatcccct tttggttacc agtcaccttc aggccattca gaggaggaaa 781 gagaggggaa tatgaagtca gccaagcccc aagtgaacca cagtcagcat ggggaaagcc 841 agcgggcctt gagccccctg cagtctactc tgagttctgc tgcatctcct tcccaagcgt 901 atgagaccta tattgaaaat ggactcatat gccttaaaca caaaattaga aacatcgaga 961 aaaagaagct caaactggag gattataagg atcgcctgaa aagtggagag catcttaatc 1021 cagaccagtt ggaagctgta gagaaatatg aagaagtgct acataatttg gaatttgcca 1081 aggagcttca aaaaaccttt tctgggttga gcctagatct actaaaagcg caaaagaagg 1141 cccagagaag ggagcacatg ctaaaacttg aggctgagaa gaaaaagctt cgaactatac 1201 ttcaagttca gtatgtattg cagaacttga cacaggagca cgtacaaaaa gacttcaaag 1261 ggggtttgaa tggtgcagtg tatttgcctt caaaagaact tgactacctc attaagtttt 1321 caaaactgac ctgccctgaa agaaatgaaa gtctgagtgt tgaagaccag atggagcagt 1381 catccttgta cttttgggac cttttggaag gtagtgagaa agcagtggta ggaacgacat 1441 acaaacactt gaaggatcta ctgtctaaat tgctgaactc aggctatttt gaaagtatcc 1501 cagttcccaa aaatgccaag gaaaaggaag taccactgga ggaagaaatg ctaatacaat 1561 cagagaaaaa aacacaatta tcgaagactg aatctgtcaa agagtcagag tctctaatgg 1621 aatttgccca gccagagata caaccacaag agtttcttaa cagacgctat atgacagaag 1681 tagattattc aaacaaacaa ggcgaagagc aaccttggga agcagattat gctagaaaac 1741 caaatctccc aaaacgttgg gatatgctta ctgaaccaga tggtcaagag aagaaacagg 1801 agtcctttaa gtcctgggag gcttctggta agcaccagga ggtatccaag cctgcagttt 1861 ccttagaaca gaggaaacaa gacacctcaa aactcaggtc tactctgccg gaagagcaga 1921 agaagcagga gatctccaaa tccaagccat ctcctagcca gtggaagcaa gatacaccta 1981 aatccaaagc agggtatgtt caagaggaac aaaagaaaca ggagacacca aagctgtggc 2041 cagttcagct gcagaaagaa caagatccaa agaagcaaac tccaaagtct tggacacctt 2101 ccatgcagag cgaacagaac accaccaagt catggaccac tcccatgtgt gaagaacagg 2161 attcaaaaca gccagagact ccaaaatcct gggaaaacaa tgttgagagt caaaaacact 2221 ctttaacatc acagtcacag atttctccaa agtcctgggg agtagctaca gcaagcctca 2281 taccaaatga ccagctgctg cccaggaagt tgaacacaga acccaaagat gtgcctaagc 2341 ctgtgcatca gcctgtaggt tcttcctcta cccttccgaa ggatccagta ttgaggaaag 2401 aaaaactgca ggatctgatg actcagattc aaggaacttg taactttatg caagagtctg 2461 ttcttgactt tgacaaacct tcaagtgcaa ttccaacgtc acaaccgcct tcagctactc 2521 caggtagccc cgtagcatct aaagaacaaa atctgtccag tcaaagtgat tttcttcaag 2581 agccgttaca ggctacttct tctccagtta cttgtagctc aaatgcttgc ttggttacta 2641 ccgatcaggc ttcttctgga tctgaaacag agtttatgac ctcagagact cctgaggcag 2701 caattccccc aggcaagcaa ccgtcttcac tagcttctcc aaatcctccc atggcaaagg 2761 gctctgaaca gggcttccag tcacctccag caagtagtag ttcagtaacc attaacacag 2821 caccctttca agccatgcag acagtattta acgttaatgc acctctgcct ccacgaaaag 2881 aacaagaaat aaaagaatcc ccttattcac ctggctacaa tcaaagtttt accacagcaa 2941 gtacacaaac accaccccag tgccaactgc catctataca tgtagaacaa actgtccatt 3001 ctcaagagac tgcaaattat catcctgatg gaactattca agtaagcaat ggtagccttg 3061 ccttttaccc agcacagacg aatgtgtttc ccagacctac tcagccattt gtcaatagcc 3121 ggggatctgt tagaggatgt actcgtggtg ggagattaat aaccaattcc tatcggtccc 3181 ctggtggtta taaaggtttt gatacttata gaggactccc ttcaatttcc aatggaaatt 3241 atagccagct gcagttccaa gctagagagt attctggagc accttattcc caaagggata 3301 atttccagca gtgttataag cgaggaggga catctggtgg tccacgagca aattcgagag 3361 ctaactgctt cattatgaga aactcactgt tgctaataaa acagcagggt ggagtgattc 3421 ttctcaggtg agcagcccag aaagagacaa cgaaaccttt aacagtggtg actctggaca 3481 aggagactcc cgtagcatga cccctgtgga tgtgccagtg acaaatccag cagcc //