LOCUS BC117463 786 bp mRNA linear HUM 06-OCT-2006
DEFINITION Homo sapiens zinc finger, MYM-type 6, mRNA (cDNA clone
IMAGE:40126014), complete cds.
ACCESSION BC117463
VERSION BC117463.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 786)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 786)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: O Column: 15
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..786
/db_xref="H-InvDB:HIT000387751"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40126014"
/tissue_type="Brain, cerebral cortex and lung, PCR rescued
clones"
/clone_lib="NIH_MGC_322"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CATGAATC"
gene 1..786
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
CDS 97..609
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/codon_start=1
/product="ZMYM6 protein"
/protein_id="AAI17464.1"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
/translation="MKEPLDGECGKAVVPQQELLDKIKEEPDNAQEYGCVQQPKTQES
KLKIGGVSSVNERPIAQQLNPGFQLSFASSGPSVLLPSVPAVAIKVFCSGCKKMLYKG
QTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKYKILNIPFYFTFFLVCI
LFSSNILLIL"
BASE COUNT 243 a 157 c 143 g 243 t
ORIGIN
1 cagtcggaga ccacattgcc tcgtgtccaa ctatccatta ccaagaagaa atctattcgt
61 ttgagcctga gacactcttt gaggtaaaaa attagaatga aagaaccttt ggatggtgaa
121 tgtggcaaag cagtggtacc acagcaggag cttctggaca aaattaaaga agaaccagac
181 aatgctcaag agtatggatg tgtccaacag ccaaaaactc aagaaagtaa attgaaaatt
241 ggtggtgtgt cttcagttaa tgagagacct attgcccagc agttgaaccc aggctttcag
301 ctttcttttg catcatctgg cccaagtgtg ttgcttcctt cagttccagc tgttgctatt
361 aaggtttttt gttctggttg taaaaaaatg ctttataagg gccaaactgc atatcataag
421 acaggatcta ctcagctctt ctgctccaca cgatgcatca ccagacattc ttcacctgcc
481 tgcctgccac ctcctcccaa gaaaacctgc acaaactgct cgaagtataa aattcttaac
541 atcccttttt actttacctt ttttttagtg tgtatattgt ttagttcaaa catactgttg
601 atactttaaa tctcttcagc atgtatctgt agaaataact ttttagttaa tggaagaatt
661 caccaatttt aaagttttgc aacattaaat aagtgacttg gtgttagaat attgcctaaa
721 ccagttttct atcactttaa attttactat ggaaagaaat aacaaatgac atgtgggaat
781 tgcagg
//