LOCUS       BC117441                1080 bp    mRNA    linear   HUM 26-JUN-2006
DEFINITION  Homo sapiens C-type lectin domain family 4, member A, mRNA (cDNA
            clone MGC:151050 IMAGE:40125992), complete cds.
ACCESSION   BC117441
VERSION     BC117441.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1080)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 6 Row: N Column: 17.
FEATURES             Location/Qualifiers
     source          1..1080
                     /db_xref="H-InvDB:HIT000387729"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:151050 IMAGE:40125992"
                     /tissue_type="Lung, PCR rescued clones"
                     /clone_lib="NIH_MGC_299"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: ACTGTTTC"
     gene            1..1080
                     /gene="CLEC4A"
                     /gene_synonym="DCIR"
                     /gene_synonym="DDB27"
                     /gene_synonym="HDCGC13P"
                     /gene_synonym="LLIR"
                     /db_xref="GeneID:50856"
                     /db_xref="HGNC:HGNC:13257"
                     /db_xref="MIM:605306"
     CDS             143..856
                     /gene="CLEC4A"
                     /gene_synonym="DCIR"
                     /gene_synonym="DDB27"
                     /gene_synonym="HDCGC13P"
                     /gene_synonym="LLIR"
                     /codon_start=1
                     /product="C-type lectin domain family 4, member A"
                     /protein_id="AAI17442.1"
                     /db_xref="GeneID:50856"
                     /db_xref="HGNC:HGNC:13257"
                     /db_xref="MIM:605306"
                     /translation="MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPLKSNTGFPK
                     LLCASLLIFFLLLAISFFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETA
                     WSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEE
                     SAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWN
                     DVNCLGPQRSVCEMMKIHL"
BASE COUNT          303 a          212 c          237 g          328 t
ORIGIN      
        1 tgcctatctg gtgcctctgc tctccactag ttgagtgaaa ggaaggaggt aatttaccac
       61 catgtttggt tcctgtttat aagatgtttt aagaaagatt tgaaacagat tttctgaaga
      121 aagcagaagc tctcttccca ttatgacttc ggaaatcact tatgctgaag tgaggttcaa
      181 aaatgaattc aagtcctcag gcatcaacac agcctcttct gcagcttcca aggagaggac
      241 tgcccctctc aaaagtaata ccggattccc caagctgctt tgtgcctcac tgttgatatt
      301 tttcctgcta ttggcaatct cattctttat tgcttttgtc attttctttc aaaaatattc
      361 tcagcttctt gaaaaaaaga ctacaaaaga gctggttcat acaacattgg agtgtgtgaa
      421 aaaaaatatg cccgtggaag agacagcctg gagctgttgc ccaaagaatt ggaagtcatt
      481 tagttccaac tgctacttta tttctactga atcagcatct tggcaagaca gtgagaagga
      541 ctgtgctaga atggaggctc acctgctggt gataaacact caagaagagc aggatttcat
      601 cttccagaat ctgcaagaag aatctgctta ttttgtgggg ctctcagatc cagaaggtca
      661 gcgacattgg caatgggttg atcagacacc atacaatgaa agttccacat tctggcatcc
      721 acgtgagccc agtgatccca atgagcgctg cgttgtgcta aattttcgta aatcacccaa
      781 aagatggggc tggaatgatg ttaattgtct tggtcctcaa aggtcagttt gtgagatgat
      841 gaagatccac ttatgaactg aacattctcc atgaacaggt ggttggattg gtatctgtca
      901 ttgtagggat agataataag ctcttcttat tcatgtgtaa gggaggtcca tagaatttag
      961 gtggtctgtc aactattcta cttatgagag aattggtctg tacattgact gattcacttt
     1021 ttcataaagt gagcatttat tgagcatttt ttcatgtgcc agagcctgta ctggaggccc
//